RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ATP1B1P05026 303 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 SBK3P0C264 359 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 CTAGE8P0CG41 777 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 TAC1P20366 129 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 S1PR1P21453 382 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 CDK9P50750 372 aaKnown RBP19.26■□□□□ 0.67
VSX1-206ENST00000444511 DLX5P56178 289 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 CRYZQ08257 329 aaKnown RBP19.26■□□□□ 0.67
VSX1-206ENST00000444511 MAP4K2Q12851 820 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 TESK1Q15569 626 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 NNATQ16517 81 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 PRICKLE4Q2TBC4 344 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 GLE1Q53GS7 698 aaKnown RBP19.26■□□□□ 0.67
VSX1-206ENST00000444511 FAM111BQ6SJ93 734 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 CTAGE4Q8IX94 777 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 PM20D2Q8IYS1 436 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 MMP21Q8N119 569 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 C1orf52Q8N6N3 182 aaKnown RBP19.26■□□□□ 0.67
VSX1-206ENST00000444511 TM4SF18Q96CE8 201 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 GNRHR2Q96P88 292 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 HBEGFQ99075 208 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 TIMP4Q99727 224 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 FAIM2Q9BWQ8 316 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 METTL7AQ9H8H3 244 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 MAT2BQ9NZL9 334 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 DTX4Q9Y2E6 619 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 L3MBTL1Q9Y468 752 aa19.26■□□□□ 0.67
VSX1-206ENST00000444511 INTS1Q8N201 2190 aaKnown RBP19.25■□□□□ 0.67
VSX1-206ENST00000444511 CDH16O75309 829 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 PPM1BO75688 479 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 OR4F21O95013 312 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 HPNP05981 417 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 ABCB1P08183 1280 aaPredicted RBP19.25■□□□□ 0.67
VSX1-206ENST00000444511 NAGAP17050 411 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 ALDH9A1P49189 494 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 CLCQ05315 142 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 EXOSC7Q15024 291 aaKnown RBP19.25■□□□□ 0.67
VSX1-206ENST00000444511 ACSF3Q4G176 576 aaPredicted RBP19.25■□□□□ 0.67
VSX1-206ENST00000444511 FNDC7Q5VTL7 733 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 ARSKQ6UWY0 536 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 SEM1Q6ZVN7 128 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 TMEM151AQ8N4L1 468 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 TMEM41AQ96HV5 264 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 ITPAQ9BY32 194 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 UBQLN3Q9H347 655 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 VPS29Q9UBQ0 182 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 ZNF780BQ9Y6R6 833 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 F8P00451 2351 aa19.25■□□□□ 0.67
VSX1-206ENST00000444511 DVL2O14641 736 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 GNB5O14775 395 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 SUPT7LO94864 414 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 ESRRBO95718 433 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 EPPINO95925 133 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 KRT6AP02538 564 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 KRT6BP04259 564 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 HSD17B3P37058 310 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 KRT6CP48668 564 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 TRA2BP62995 288 aaKnown RBP19.24■□□□□ 0.67
VSX1-206ENST00000444511 PLCXD2Q0VAA5 305 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 MGAT2Q10469 447 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 RASA2Q15283 850 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 SF3B4Q15427 424 aaKnown RBP eCLIP19.24■□□□□ 0.67
VSX1-206ENST00000444511 SPNS3Q6ZMD2 512 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 LACC1Q8IV20 430 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 CDYL2Q8N8U2 506 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 ADCY4Q8NFM4 1077 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 HSPBAP1Q96EW2 488 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 LCORQ96JN0 433 aaPredicted RBP19.24■□□□□ 0.67
VSX1-206ENST00000444511 PFDN4Q9NQP4 134 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 ZNF639Q9UID6 485 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 ZNF225Q9UK10 706 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 SLC6A5Q9Y345 797 aa19.24■□□□□ 0.67
VSX1-206ENST00000444511 AKAP9Q99996 3911 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 MANBAO00462 879 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 ACOX3O15254 700 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 HSD3B1P14060 373 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 BMP5P22003 454 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 HSD3B2P26439 372 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 UQCRC1P31930 480 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 WNT3P56703 355 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 TCHHL1Q5QJ38 904 aaPredicted RBP19.23■□□□□ 0.67
VSX1-206ENST00000444511 FAM219BQ5XKK7 198 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 TIGD3Q6B0B8 471 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 VASNQ6EMK4 673 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 ANGPTL8Q6UXH0 198 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 NUP54Q7Z3B4 507 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 TNIP2Q8NFZ5 429 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 OR52R1Q8NGF1 315 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 OR1J4Q8NGS1 313 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 MTBPQ96DY7 904 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 OMA1Q96E52 524 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 LRRC46Q96FV0 321 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 PRDM14Q9GZV8 571 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 TMEM216Q9P0N5 145 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 PRODH2Q9UF12 536 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 CAMK2AQ9UQM7 478 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 PLLPQ9Y342 182 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 NCKAP5O14513 1909 aa19.23■□□□□ 0.67
VSX1-206ENST00000444511 ANKRD17O75179 2603 aaKnown RBP19.22■□□□□ 0.67
VSX1-206ENST00000444511 CBX7O95931 251 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms