RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 CRLF3Q8IUI8 442 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CSNK1A1LQ8N752 337 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SRFBP1Q8NEF9 429 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 HUS1BQ8NHY5 278 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 WDR20Q8TBZ3 569 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CREB3L4Q8TEY5 395 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF473Q8WTR7 871 aaKnown RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SLC13A3Q8WWT9 602 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 N4BP2L2Q92802 583 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF501Q96CX3 271 aaPredicted RBP5.43□□□□□ -1.54
SCAF11-213ENST00000550629 MVB12AQ96EY5 273 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CMTM7Q96FZ5 175 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 OR6C1Q96RD1 312 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SORT1Q99523 831 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 SERPINI1Q99574 410 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 CENPKQ9BS16 269 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ALOXE3Q9BYJ1 711 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 ROGDIQ9GZN7 287 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 POLR1BQ9H9Y6 1135 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 RARRES3Q9UL19 164 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 KLHL20Q9Y2M5 609 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 LOXL2Q9Y4K0 774 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 DNAJC15Q9Y5T4 150 aa5.43□□□□□ -1.54
SCAF11-213ENST00000550629 PTPRZ1P23471 2315 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 A0A088AWK7 358 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LOC105369274A0A096LPK9 316 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LOC102723532A0A0G2JNH3 316 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 A0A0J9YVX5 310 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 FEZF1A0PJY2 475 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 HYKKA2RU49 373 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LRIT2A6NDA9 550 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 EFCAB7A8K855 629 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TCP11X1B4DZS4 312 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TMEM150CB9EJG8 249 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SLC28A1O00337 649 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 POLR1CO15160 346 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 HDAC3O15379 428 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 NVLO15381 856 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 NDUFS4O43181 175 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 RGS14O43566 566 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ITM2AO43736 263 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LCMT2O60294 686 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 EDF1O60869 148 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LYPLA1O75608 230 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ONECUT2O95948 504 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 PCNAP12004 261 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF10P21506 573 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 PRPH2P23942 346 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CD82P27701 267 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CCR10P46092 362 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 VSX2P58304 361 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CTXN1P60606 82 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 IRX1P78414 480 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 HNRNPA0Q13151 305 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 KCNAB1Q14722 419 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ABRAXAS2Q15018 415 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 NDUFA9Q16795 377 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SMU1Q2TAY7 513 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SPIN4Q56A73 249 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 XKR7Q5GH72 579 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 WASHC2DQ5SRD0 308 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 DEPDC1Q5TB30 811 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ABHD17BQ5VST6 288 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 PRMT9Q6P2P2 845 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CEACAM20Q6UY09 585 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 PPP1R3BQ86XI6 285 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 PLD3Q8IV08 490 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 WDR75Q8IWA0 830 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 OR4N4Q8N0Y3 316 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 FITM2Q8N6M3 262 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ZNF781Q8N8C0 355 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TTC29Q8NA56 475 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 OR2L5Q8NG80 312 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 OR1L3Q8NH93 324 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SELENOMQ8WWX9 145 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LINC00476Q8WZB0 136 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CCT6BQ92526 530 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 RGMAQ96B86 450 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 MOCOSQ96EN8 888 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 C19orf60Q96EN9 201 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 RNF31Q96EP0 1072 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 MARS2Q96GW9 593 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 LRFN5Q96NI6 719 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 QRFPRQ96P65 431 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TAAR9Q96RI9 348 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 KCNA7Q96RP8 456 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 MTERF1Q99551 399 aaKnown RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 C17orf62Q9BQA9 187 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 TBCDQ9BTW9 1192 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 MS4A8Q9BY19 250 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 C20orf27Q9GZN8 174 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 C11orf54Q9H0W9 315 aaPredicted RBP5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SPNS1Q9H2V7 528 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 SLC39A1Q9NY26 324 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 AHSPQ9NZD4 102 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 VPS29Q9UBQ0 182 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 ZDHHC2Q9UIJ5 367 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 CDC14AQ9UNH5 594 aa5.42□□□□□ -1.54
SCAF11-213ENST00000550629 WBP11Q9Y2W2 641 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms