RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 ZNF385BQ569K4 471 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 FAM180BQ6P0A1 224 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 SAMD14Q8IZD0 417 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-222ENST00000520948 ZADH2Q8N4Q0 377 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 CDC26Q8NHZ8 85 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 SUN3Q8TAQ9 357 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 STON2Q8WXE9 905 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 TM9SF4Q92544 642 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 GFM2Q969S9 779 aaKnown RBP16.87■□□□□ 0.29
VEGFA-222ENST00000520948 EXOSC8Q96B26 276 aaKnown RBP16.87■□□□□ 0.29
VEGFA-222ENST00000520948 SENP5Q96HI0 755 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-222ENST00000520948 OR52B2Q96RD2 323 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 CXorf21Q9HAI6 301 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 KCNK13Q9HB14 408 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 PCDHGA10Q9Y5H3 936 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF780BQ9Y6R6 833 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 DOPEY1Q5JWR5 2465 aa16.87■□□□□ 0.29
VEGFA-222ENST00000520948 AKAP10O43572 662 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 LRATO95237 230 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 CT62P0C5K7 136 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 COX7A2P14406 83 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 PCSK2P16519 638 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 ITGA3P26006 1051 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 FRKP42685 505 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-222ENST00000520948 PRICKLE4Q2TBC4 344 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 CRB2Q5IJ48 1285 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 Q6ZS92 163 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 CCDC116Q8IYX3 515 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 ARMC10Q8N2F6 343 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 LRRC25Q8N386 305 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF321PQ8N8H1 164 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 OR1N1Q8NGS0 311 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 SLC2A12Q8TD20 617 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 NUDT8Q8WV74 236 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 RIT1Q92963 219 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 NCLNQ969V3 563 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 CTHRC1Q96CG8 243 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF317Q96PQ6 595 aaPredicted RBP16.86■□□□□ 0.29
VEGFA-222ENST00000520948 EBF4Q9BQW3 602 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 MIEF1Q9NQG6 463 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 AIG1Q9NVV5 245 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF639Q9UID6 485 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 GPR45Q9Y5Y3 372 aa16.86■□□□□ 0.29
VEGFA-222ENST00000520948 HRKO00198 91 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 SCAMP2O15127 329 aaKnown RBP16.85■□□□□ 0.29
VEGFA-222ENST00000520948 OR10H2O60403 315 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 CLPSP04118 112 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 PRPS1L1P21108 318 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 SOX11P35716 441 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 AQP5P55064 265 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 FUT7Q11130 342 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 IGFL2Q6UWQ7 119 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 R3HCC1LQ7Z5L2 792 aaKnown RBP16.85■□□□□ 0.29
VEGFA-222ENST00000520948 KIF2BQ8N4N8 673 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 KRTCAP2Q8N6L1 136 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 BRIX1Q8TDN6 353 aaKnown RBP16.85■□□□□ 0.29
VEGFA-222ENST00000520948 COQ8BQ96D53 544 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 VMP1Q96GC9 406 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 FBXL20Q96IG2 436 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 NPAS2Q99743 824 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 CCDC28BQ9BUN5 200 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 BRINP2Q9C0B6 783 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 MAT2BQ9NZL9 334 aa16.85■□□□□ 0.29
VEGFA-222ENST00000520948 ITPR2Q14571 2701 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 TMEM200CA6NKL6 621 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 KLHL41O60662 606 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 MPIP34949 423 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 RPL3P39023 403 aaKnown RBP16.84■□□□□ 0.29
VEGFA-222ENST00000520948 CLCN2P51788 898 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF267Q14586 743 aaPredicted RBP16.84■□□□□ 0.29
VEGFA-222ENST00000520948 ANKRD26P1Q6NSI1 321 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 FAM111BQ6SJ93 734 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 CAMKMTQ7Z624 323 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 GALNT12Q8IXK2 581 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 FAM9CQ8IZT9 166 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 OR7A2PQ8NGA2 310 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 OR8K3Q8NH51 312 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 RFWD2Q8NHY2 731 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 ZNF675Q8TD23 568 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 DOK4Q8TEW6 326 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 PPCDCQ96CD2 204 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 ART5Q96L15 291 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 OR8D2Q9GZM6 311 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 MAPRE3Q9UPY8 281 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 CPAMD8Q8IZJ3 1885 aa16.84■□□□□ 0.29
VEGFA-222ENST00000520948 ENO4A6NNW6 628 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 PRKNO60260 465 aaPredicted RBP16.83■□□□□ 0.28
VEGFA-222ENST00000520948 SLC37A1P57057 533 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF628Q5EBL2 1059 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 AGAP7PQ5VUJ5 663 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 TMEM198Q66K66 360 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 B3GNTL1Q67FW5 361 aaPredicted RBP16.83■□□□□ 0.28
VEGFA-222ENST00000520948 CRYBG3Q68DQ2 2970 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 NXNQ6DKJ4 435 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 ACAD11Q709F0 780 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF615Q8N8J6 731 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 AMDHD1Q96NU7 426 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 AGAP4Q96P64 663 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms