RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CDC20Q12834 499 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 ELAVL1Q15717 326 aaKnown RBP18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 VPS26BQ4G0F5 336 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 CRTC2Q53ET0 693 aaPredicted RBP18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 ATP1A1-AS1Q5TC04 95 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 FAAH2Q6GMR7 532 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 OR5P2Q8WZ92 322 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 BTNL2Q9UIR0 455 aa18.54■□□□□ 0.56
PDLIM2-221ENST00000622702 MYOCOSA0A1B0GUC4 107 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 PRDX6P30041 224 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 MANFP55145 182 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 OR4D2P58180 307 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 TLR1Q15399 786 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 CPEB2Q7Z5Q1 589 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 PPP1R32Q7Z5V6 425 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 RP9Q8TA86 221 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 ZNF675Q8TD23 568 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 CCDC115Q96NT0 180 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 RMND5AQ9H871 391 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 CHD6Q8TD26 2715 aa18.53■□□□□ 0.56
PDLIM2-221ENST00000622702 CDC14CA4D256 554 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 ASPDHA6ND91 283 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 SLITRK5O94991 958 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 IFNA16P05015 189 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 IL10RAQ13651 578 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 CYLC2Q14093 348 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 TERF2Q15554 542 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 MAPKAPK3Q16644 382 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 SPRED3Q2MJR0 410 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 SFT2D3Q587I9 215 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 TRPM8Q7Z2W7 1104 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 ZNF551Q7Z340 670 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 SNX32Q86XE0 403 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 OR9A2Q8NGT5 310 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 PSMA8Q8TAA3 256 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 ADAMTS17Q8TE56 1095 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 PPWD1Q96BP3 646 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 CXorf21Q9HAI6 301 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 NEUROD4Q9HD90 331 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 SERHLQ9NQF3 203 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 PNO1Q9NRX1 252 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 NDUFAF1Q9Y375 327 aa18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 NUP214P35658 2090 aaPredicted RBP18.52■□□□□ 0.56
PDLIM2-221ENST00000622702 LOC100653049A0A140TA62 436 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 BBIP1A8MTZ0 92 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 SOCS6O14544 535 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 KRT34O76011 436 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 C6orf47O95873 294 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 IFI6P09912 130 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 COX4I1P13073 169 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 EFNA1P20827 205 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 NT5EP21589 574 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 MAP4K2Q12851 820 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 KRT72Q14CN4 511 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 PRICKLE4Q2TBC4 344 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 ZNF628Q5EBL2 1059 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 COQ5Q5HYK3 327 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 KIRREL2Q6UWL6 708 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 DGAT2L6Q6ZPD8 337 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 ANKRD46Q86W74 232 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 RAB43Q86YS6 212 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 CLECL1Q8IZS7 167 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 PTPMT1Q8WUK0 201 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 GTF2H4Q92759 462 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 RIT1Q92963 219 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 CTHRC1Q96CG8 243 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 CMTM5Q96DZ9 223 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 ITCHQ96J02 903 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 WDR77Q9BQA1 342 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 MESP1Q9BRJ9 268 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 LEF1Q9UJU2 399 aaPredicted RBP18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 MAN2B2Q9Y2E5 1009 aa18.52■□□□□ 0.55
PDLIM2-221ENST00000622702 IGSF10Q6WRI0 2623 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 PLOD2O00469 737 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 ANGPT2O15123 496 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 OTX2P32243 289 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 HBA1P69905 142 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 RHDQ02161 417 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 MGAT2Q10469 447 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 HSPB3Q12988 150 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 STX5Q13190 355 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 LTB4RQ15722 352 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 DEFB109BQ30KR1 87 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 GALNT12Q8IXK2 581 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 OR11G2Q8NGC1 345 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 OR14A16Q8NHC5 309 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 GOT1L1Q8NHS2 421 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 DAZLQ92904 295 aaKnown RBP18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 C8orf44Q96CB5 159 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 VPS50Q96JG6 964 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 IP6K3Q96PC2 410 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 LPAR4Q99677 370 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 ZNF700Q9H0M5 742 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 TAS2R9Q9NYW1 312 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 MAT2BQ9NZL9 334 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 PCDHGB4Q9UN71 923 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 ERVK-11Q9UQG0 969 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 CLCA3PQ9Y6N3 262 aa18.51■□□□□ 0.55
PDLIM2-221ENST00000622702 ZFYVE26Q68DK2 2539 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms