RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PHF21BQ96EK2 531 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 RBM18Q96H35 190 aaKnown RBP10.93□□□□□ -0.66
GABPB1-206ENST00000543881 SGCZQ96LD1 299 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 C16orf45Q96MC5 204 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-206ENST00000543881 NSUN5Q96P11 429 aaKnown RBP10.93□□□□□ -0.66
GABPB1-206ENST00000543881 CENPKQ9BS16 269 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 NOL11Q9H8H0 719 aaKnown RBP10.93□□□□□ -0.66
GABPB1-206ENST00000543881 IL1RL2Q9HB29 575 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 PROK2Q9HC23 129 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 ZBTB26Q9HCK0 441 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 SACM1LQ9NTJ5 587 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 TUBA8Q9NY65 449 aaPredicted RBP10.93□□□□□ -0.66
GABPB1-206ENST00000543881 PSD3Q9NYI0 1048 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 Q9UFV3 132 aa10.93□□□□□ -0.66
GABPB1-206ENST00000543881 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ACOT7O00154 380 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 FOXE1O00358 373 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 BCKDKO14874 412 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 PGRMC2O15173 223 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 CLDN9O95484 217 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 AIFM1O95831 613 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 IGHG3P01860 377 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ECHS1P30084 290 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 TLX1P31314 330 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 BUD31P41223 144 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 KIR2DL3P43628 341 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 SLC37A1P57057 533 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 HERVK_113P63132 956 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ERVK-8P63133 956 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 BIKQ13323 160 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ZNF267Q14586 743 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 HYAL4Q2M3T9 481 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 SPRED3Q2MJR0 410 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 NDUFAF5Q5TEU4 345 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 METTL2BQ6P1Q9 378 aaKnown RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 RGS9BPQ6ZS82 235 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 RPS27LQ71UM5 84 aaKnown RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 SLC22A16Q86VW1 577 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 CDC20BQ86Y33 519 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 FAM109AQ8N4B1 249 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 MMGT1Q8N4V1 131 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 C7orf57Q8NEG2 295 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 REPS1Q96D71 796 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 MBD6Q96DN6 1003 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 SMC6Q96SB8 1091 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 CNPPD1Q9BV87 410 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ERVK-6Q9BXR3 956 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 LYARQ9NX58 379 aaKnown RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 TEX10Q9NXF1 929 aaPredicted RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 CRIM1Q9NZV1 1036 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 PCTPQ9UKL6 214 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 ERVK-19Q9WJR5 959 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 TNPO3Q9Y5L0 923 aaKnown RBP10.92□□□□□ -0.66
GABPB1-206ENST00000543881 FAM215AQ9Y5M1 114 aa10.92□□□□□ -0.66
GABPB1-206ENST00000543881 VPS13CQ709C8 3753 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 A0A1B0GVC2 190 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 OR14I1A6ND48 311 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 P04436 131 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 RFPL3SP0C7P2 107 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 NR2F6P10588 404 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 TRAF3Q13114 568 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 EBPQ15125 230 aaKnown RBP10.91□□□□□ -0.66
GABPB1-206ENST00000543881 WHAMMP3Q1A5X7 153 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 SLC25A35Q3KQZ1 300 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 RTL6Q6ICC9 239 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 CYP20A1Q6UW02 462 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 TRILQ7L0X0 811 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 WFDC11Q8NEX6 87 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 PAQR8Q8TEZ7 354 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 DCAKDQ8WVC6 231 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 RIT1Q92963 219 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 SPACA9Q96E40 222 aaPredicted RBP10.91□□□□□ -0.66
GABPB1-206ENST00000543881 GAL3ST4Q96RP7 486 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 PAFAH2Q99487 392 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 WWTR1Q9GZV5 400 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 XPR1Q9UBH6 696 aa10.91□□□□□ -0.66
GABPB1-206ENST00000543881 NCKAP5O14513 1909 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 IQANK1A0A1B0GTG1 560 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ATP6AP2A0A1C7CYW4 349 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 A6NNC1 897 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 STX16-NPEPL1H3BU86 382 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 PPP6CO00743 305 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 STX16O14662 325 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 DYRK3O43781 588 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 OR10H2O60403 315 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ATP6AP2O75787 350 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 INHBAP08476 426 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 RBP1P09455 135 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SBK3P0C264 359 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 FBXO45P0C2W1 286 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 CT62P0C5K7 136 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ENDOUP21128 410 aaKnown RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ADSLP30566 484 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SSTR4P31391 388 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 ADH7P40394 386 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 CCNG1P51959 295 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 PHEXP78562 749 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 PRAMEF20Q5VT98 475 aa10.9□□□□□ -0.66
GABPB1-206ENST00000543881 SLC22A10Q63ZE4 541 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms