RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 CSH2P0DML3 217 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 CT45A10P0DMU9 189 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ACAT1P24752 427 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 CD1BP29016 333 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 CSNK1DP48730 415 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 POU3F4P49335 361 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 LHX2P50458 406 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 UCP2P55851 309 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 RPL27P61353 136 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 MPP1Q00013 466 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 BCL2L1Q07817 233 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 EPS8Q12929 822 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 GPR50Q13585 617 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 SNTB1Q13884 538 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 DHX8Q14562 1220 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 ELAVL3Q14576 367 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 DCAF4L1Q3SXM0 396 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 UNC50Q53HI1 259 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 C5orf47Q569G3 176 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 MS4A13Q5J8X5 152 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 EOGTQ5NDL2 527 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ARMC4Q5T2S8 1044 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 TAF3Q5VWG9 929 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 HSD17B13Q7Z5P4 300 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 CENPVQ7Z7K6 275 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 TMEM110Q86TL2 294 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 DNAAF5Q86Y56 855 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ZNF100Q8IYN0 542 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 OR4F5Q8NH21 305 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 SLC22A8Q8TCC7 542 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 FBXO25Q8TCJ0 367 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 SPSB1Q96BD6 273 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 RMI2Q96E14 147 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 RBMXL1Q96E39 390 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 LINC00477Q96M19 166 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 SPATA33Q96N06 139 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 TSSK2Q96PF2 358 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 GCNAQ96QF7 691 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ERGIC2Q96RQ1 377 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 CITED2Q99967 270 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 POLR3GLQ9BT43 218 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 DPH7Q9BTV6 452 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ST6GALNAC5Q9BVH7 336 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 OR51J1Q9H342 316 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 FN3KQ9H479 309 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 PTGES2Q9H7Z7 377 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ADGRL4Q9HBW9 690 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 MRPL15Q9P015 296 aaKnown RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 TBX21Q9UL17 535 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 GTF2A1LQ9UNN4 478 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 KLK4Q9Y5K2 254 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 RSF1Q96T23 1441 aaPredicted RBP0.26□□□□□ -2.37
COPB1-212ENST00000534771 BRWD3Q6RI45 1802 aa0.26□□□□□ -2.37
COPB1-212ENST00000534771 ARHGAP21Q5T5U3 1957 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 FGD5Q6ZNL6 1462 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PLEKHG1Q9ULL1 1385 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 A0A096LNJ9 63 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 hCG_1809904A0A1W2PP81 198 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 A0A1W2PPE2 198 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 A0A1W2PR64 198 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 A6NCN8 305 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 RIPK2O43353 540 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 LCMT2O60294 686 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 DOK2O60496 412 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 N4BP1O75113 896 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 TBX10O75333 385 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PEX14O75381 377 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 CSDE1O75534 798 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 PNPP00491 289 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 TIMP1P01033 207 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PCCAP05165 728 aaPredicted RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 NUDT17P0C025 328 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 SPP1P10451 314 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 IGHV1-2P23083 117 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PSMA3P25788 255 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 HTR1EP28566 365 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 EEF1DP29692 281 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 CTRLP40313 264 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PTGDSP41222 190 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 RPS9P46781 194 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 RXRGP48443 463 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 ALDH3B2P48448 385 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 CSE1LP55060 971 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 DCAF7P61962 342 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PSMC6P62333 389 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 RPP38P78345 283 aaKnown RBP0.25□□□□□ -2.37
COPB1-212ENST00000534771 CETN1Q12798 172 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 CHAF1BQ13112 559 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 IL11RAQ14626 422 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 PSMD6Q15008 389 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 KRT31Q15323 416 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 TMEM95Q3KNT9 176 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 HSP90AB4PQ58FF6 505 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 LRRC73Q5JTD7 316 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 DCST2Q5T1A1 773 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 CCDC30Q5VVM6 783 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 LYPLAL1Q5VWZ2 237 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 KLHL10Q6JEL2 608 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 BTNL8Q6UX41 500 aa0.25□□□□□ -2.37
COPB1-212ENST00000534771 MFSD7Q6UXD7 560 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms