RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 OR6B1O95007 311 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 GSTA1P08263 222 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 GNSP15586 552 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 GAP43P17677 238 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 IL10P22301 178 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 ACP1P24666 158 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 LMO2P25791 158 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 PPP2R1BP30154 601 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 RPS4XP62701 263 aaKnown RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 ACY1Q03154 408 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 NME3Q13232 169 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 ENPP2Q13822 863 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 KLF5Q13887 457 aaPredicted RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 SIX1Q15475 284 aaPredicted RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 HAGHQ16775 308 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 RHBDD2Q6NTF9 364 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 OLFM4Q6UX06 510 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 BNIPLQ7Z465 357 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 TMEM37Q8WXS4 190 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 PNPLA2Q96AD5 504 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 CAPNS2Q96L46 248 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 JPH2Q9BR39 696 aaPredicted RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 CBWD1Q9BRT8 395 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 ATG10Q9H0Y0 220 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 HOOK1Q9UJC3 728 aaKnown RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 KLK13Q9UKR3 277 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 ODF2LQ9ULJ1 636 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 FBXO7Q9Y3I1 522 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 CPQQ9Y646 472 aa3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 TDRD15B5MCY1 1934 aaKnown RBP3.73□□□□□ -1.81
SMNDC1-205ENST00000477763 AFF2P51816 1311 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SALL1Q9NSC2 1324 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CRLF1O75462 422 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 MT-ATP6P00846 226 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 IGHV3-13P01766 116 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CXCL10P02778 98 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 OR9G9P0C7N8 305 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 PTMSP20962 102 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CCL11P51671 97 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 TKTL1P51854 596 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 BTG3Q14201 252 aaPredicted RBP3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC1A5Q15758 541 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CLPPQ16740 277 aaPredicted RBP3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SNAI3Q3KNW1 292 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 TOR1AIP1Q5JTV8 583 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 OR6B2Q6IFH4 312 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 STEAP1BQ6NZ63 245 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 EMBQ6PCB8 327 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 WDR88Q6ZMY6 472 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 GPRIN3Q6ZVF9 776 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC22A16Q86VW1 577 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 ZNF619Q8N2I2 560 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 Q8N377 158 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 HDDC3Q8N4P3 179 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 LRRC17Q8N6Y2 441 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CHDHQ8NE62 594 aaPredicted RBP3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 PYGO2Q9BRQ0 406 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 TRIM6Q9C030 488 aaPredicted RBP3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 LIME1Q9H400 295 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 Q9HAA7 133 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SEC14L4Q9UDX3 406 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 CIDEBQ9UHD4 219 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SPATA2Q9UM82 520 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC9A8Q9Y2E8 581 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 SLC6A5Q9Y345 797 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 ATG4BQ9Y4P1 393 aa3.72□□□□□ -1.81
SMNDC1-205ENST00000477763 KRT87PA6NCN2 255 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 LRP3O75074 770 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 PROS1P07225 676 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 ETS1P14921 441 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 FOSL2P15408 326 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 MATKP42679 507 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 NLRP11P59045 1033 aaKnown RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 HKDC1Q2TB90 917 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 C9orf66Q5T8R8 295 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 REP15Q6BDI9 236 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNF841Q6ZN19 808 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 YRDCQ86U90 279 aaKnown RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 LRRC49Q8IUZ0 686 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 CCDC71Q8IV32 467 aaPredicted RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 KDM8Q8N371 416 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 MRPL43Q8N983 215 aaKnown RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 MLKLQ8NB16 471 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 ZNRF1Q8ND25 227 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 OR4F5Q8NH21 305 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 PHYHIPQ92561 330 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 P3H4Q92791 437 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 TMEM45BQ96B21 275 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 C19orf43Q9BQ61 176 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 SOSTQ9BQB4 213 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 PNNQ9H307 717 aaKnown RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 FAM124BQ9H5Z6 455 aaPredicted RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 MRPL11Q9Y3B7 192 aaKnown RBP3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 RAD54L2Q9Y4B4 1467 aa3.71□□□□□ -1.82
SMNDC1-205ENST00000477763 PTPRUQ92729 1446 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 A0A0U1RRA0 63 aa3.7□□□□□ -1.82
SMNDC1-205ENST00000477763 TEX48A0A1B0GUV7 120 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms