RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 UPRTQ96BW1 309 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 MFSD3Q96ES6 412 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 TMEM176AQ96HP8 235 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 C14orf144Q96I85 54 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 GATA5Q9BWX5 397 aaPredicted RBP5.59□□□□□ -1.51
CLK1-207ENST00000461981 ITPAQ9BY32 194 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 DUSP16Q9BY84 665 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 DHX35Q9H5Z1 703 aaKnown RBP5.59□□□□□ -1.51
CLK1-207ENST00000461981 POPDC2Q9HBU9 364 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 TM7SF3Q9NS93 570 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 C2orf42Q9NWW7 574 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 LYARQ9NX58 379 aaKnown RBP5.59□□□□□ -1.51
CLK1-207ENST00000461981 EIF2B4Q9UI10 523 aaKnown RBP5.59□□□□□ -1.51
CLK1-207ENST00000461981 DRG1Q9Y295 367 aaKnown RBP5.59□□□□□ -1.51
CLK1-207ENST00000461981 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 COQ4Q9Y3A0 265 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 ANKRD12Q6UB98 2062 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 CHD7Q9P2D1 2997 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 CACNA1HO95180 2353 aa5.59□□□□□ -1.51
CLK1-207ENST00000461981 COL27A1Q8IZC6 1860 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 EDDM13A0A1B0GTR0 161 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 A0A1W2PR77 199 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 C2orf78A6NCI8 922 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SLCO1B7G3V0H7 640 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 M0R233 179 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 CACNB4O00305 520 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 RGS10O43665 173 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 PLOD3O60568 738 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SELENOFO60613 162 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 FAM20BO75063 409 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SIX6O95475 246 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 AGR2O95994 175 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 F9P00740 461 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 GPIP06744 558 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 ANXA6P08133 673 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SNRPB2P08579 225 aaKnown RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 C6P13671 934 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 MUC1P15941 1255 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 GOT1P17174 413 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 NFKB1P19838 968 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 C5AR1P21730 350 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 ATP5F1P24539 256 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 CD79BP40259 229 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 KIAA1024LP59773 190 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 TNFRSF17Q02223 184 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 LIPEQ05469 1076 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 ASAH1Q13510 395 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 FCN2Q15485 313 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 TIGD6Q17RP2 521 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 FRMPD2BQ6IN97 320 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SEZ6L2Q6UXD5 910 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 B3GNT8Q7Z7M8 397 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 ASPGQ86U10 573 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SCN4BQ8IWT1 228 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 PLD6Q8N2A8 252 aaKnown RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 NANOGP1Q8N7R0 232 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 DNAAF3Q8N9W5 541 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 HJURPQ8NCD3 748 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 CERS2Q96G23 380 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 MCCC1Q96RQ3 725 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 NEU1Q99519 415 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 DUSP23Q9BVJ7 150 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SEMA4CQ9C0C4 833 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 NXF2Q9GZY0 626 aaKnown RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 PLAC1Q9HBJ0 212 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 SMURF1Q9HCE7 757 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 FBRSL1Q9HCM7 1045 aaKnown RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 ZFP64Q9NPA5 681 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 ELOVL2Q9NXB9 296 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 DCDC2Q9UHG0 476 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 GPR160Q9UJ42 338 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 CLCA2Q9UQC9 943 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 TIMM13Q9Y5L4 95 aaPredicted RBP5.59□□□□□ -1.52
CLK1-207ENST00000461981 RAI2Q9Y5P3 530 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 HS3ST3A1Q9Y663 406 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 V9GYH0 126 aa5.59□□□□□ -1.52
CLK1-207ENST00000461981 CACNA1IQ9P0X4 2223 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 PRAMEF33A0A0G2JMD5 474 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 LOC100130705A0A1B0GUX0 176 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 TBC1D3BA6NDS4 549 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 EFCAB10A6NFE3 127 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 A8MXK9 166 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 H3BM21 787 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 CDC7O00311 574 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 TGFB1I1O43294 461 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 PRAMEF10O60809 474 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 ITGB2P05107 769 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 TSHRP16473 764 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 ERCC2P18074 760 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 PRKCHP24723 683 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 FADDQ13158 208 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 SKP2Q13309 424 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 DPYSL3Q14195 570 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 GRM3Q14832 879 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 SNRNP35Q16560 246 aaKnown RBP5.58□□□□□ -1.52
CLK1-207ENST00000461981 LGALSLQ3ZCW2 172 aaPredicted RBP5.58□□□□□ -1.52
CLK1-207ENST00000461981 FAM46CQ5VWP2 391 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 PLBD1Q6P4A8 553 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 CNSTQ6PJW8 725 aa5.58□□□□□ -1.52
CLK1-207ENST00000461981 SPESP1Q6UW49 350 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms