RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 BCL7BQ9BQE9 202 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 PELOQ9BRX2 385 aaKnown RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 LHPPQ9H008 270 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 MTHFD2LQ9H903 347 aaPredicted RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 PREBQ9HCU5 417 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 GRHPRQ9UBQ7 328 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 CCL26Q9Y258 94 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 EVPLQ92817 2033 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 CLCA1A8K7I4 914 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 MAN2B1O00754 1011 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 DLGAP1O14490 977 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 CFIP05156 583 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 OSMP13725 252 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 HNRNPA2B1P22626 353 aaKnown RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 ERVFC1P60507 584 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 NFATC3Q12968 1075 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 LIPKQ5VXJ0 399 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 BRD7Q9NPI1 651 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 TBCCD1Q9NVR7 557 aa15.92■□□□□ 0.14
PHRF1-201ENST00000264555 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
PHRF1-201ENST00000264555 C17orf113A0A1B0GUU1 675 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 IQCMA0A1B0GVH7 501 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF701M0R085 212 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 SLITRK5O94991 958 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 DBIP07108 87 aaKnown RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 MAP3K8P41279 467 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 FAM180BQ6P0A1 224 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 OR4K5Q8NGD3 323 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 NPLQ9BXD5 320 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 DOCK1Q14185 1865 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 FAM172BPA6NC97 362 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 RABIFP47224 123 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 MCCD1P59942 119 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 MC1RQ01726 317 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 ARMCX6Q7L4S7 300 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 TRIM46Q7Z4K8 759 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 C15orf40Q8WUR7 153 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 TMIGD2Q96BF3 282 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 PTCHD1Q96NR3 888 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 PDE7BQ9NP56 450 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 GPR83Q9NYM4 423 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 GNG8Q9UK08 70 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 A0A1W2PQ72 361 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 HYKKA2RU49 373 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 RPP14O95059 124 aaKnown RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 SEMA4FO95754 770 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 CSTAP01040 98 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 PTNP21246 168 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 GCGRP47871 477 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 DCDC1P59894 354 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 SIM1P81133 766 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 WSCD2Q2TBF2 565 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 GTF2IRD2BQ6EKJ0 949 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 GTF2IRD2Q86UP8 949 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 Q8N9G6 341 aaPredicted RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 TRUB1Q8WWH5 349 aaKnown RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 UPB1Q9UBR1 384 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 H0YIV9 168 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 KHNYNO15037 678 aaKnown RBP15.91■□□□□ 0.14
PHRF1-201ENST00000264555 CELP19835 753 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 STT3AP46977 705 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.91■□□□□ 0.147e-12■■□□□ 12.7
PHRF1-201ENST00000264555 PIGKQ92643 395 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 SDHAF3Q9NRP4 125 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 ANKMY1Q9P2S6 941 aa15.91■□□□□ 0.14
PHRF1-201ENST00000264555 FAM25EA8MYX2 175 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 CLEC3AO75596 197 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 CDC123O75794 336 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 NDUFV2P19404 249 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 HNRNPA0Q13151 305 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SELPLGQ14242 412 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 MLIPQ5VWP3 458 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 OR4N5Q8IXE1 308 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 HS3ST5Q8IZT8 346 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 L3MBTL4Q8NA19 623 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 C7orf57Q8NEG2 295 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 C1orf216Q8TAB5 229 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 MYLIPQ8WY64 445 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 RELTQ969Z4 430 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 C9J4A7 227 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 ACOT8O14734 319 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 CBLL1Q75N03 491 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 FKBP10Q96AY3 582 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 NMNAT1Q9HAN9 279 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 RBMX2Q9Y388 322 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SSC5DA1L4H1 1573 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 PEPDP12955 493 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 CNR2P34972 360 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 TUBB3Q13509 450 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 RPS26P11Q5JNZ5 115 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 OR2L5Q8NG80 312 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 NARS2Q96I59 477 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 SECISBP2Q96T21 854 aaKnown RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 A0A1W2PRQ8 180 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 OR52A4PA6NMU1 304 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 FOXE1O00358 373 aaPredicted RBP15.9■□□□□ 0.14
PHRF1-201ENST00000264555 JRKO75564 520 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 PPM1BO75688 479 aa15.9■□□□□ 0.14
PHRF1-201ENST00000264555 UAP1L1Q3KQV9 507 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms