RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 FBXO38Q6PIJ6 1188 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 CCDC144CPQ8IYA2 1237 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 SMC2O95347 1197 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 ADCK5Q3MIX3 580 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 LTV1Q96GA3 475 aaPredicted RBP7.88□□□□□ -1.15
LMO3-235ENST00000616247 RGS12O14924 1447 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 MED14O60244 1454 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 CCDC69A6NI79 296 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 MNS1Q8NEH6 495 aa7.88□□□□□ -1.15
LMO3-235ENST00000616247 RPAP1Q9BWH6 1393 aaPredicted RBP7.87□□□□□ -1.15
LMO3-235ENST00000616247 ADGRL1O94910 1474 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 NR1I2O75469 434 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 NEK11Q8NG66 645 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 PTPRCP08575 1304 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 SLU7O95391 586 aaKnown RBP7.87□□□□□ -1.15
LMO3-235ENST00000616247 FLIIQ13045 1269 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 ME3Q16798 604 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 SKIDA1Q1XH10 827 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 SYT10Q6XYQ8 523 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 PPP1R42Q7Z4L9 355 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 RUFY2Q8WXA3 655 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 OSBPL3Q9H4L5 887 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 PIK3R4Q99570 1358 aa7.87□□□□□ -1.15
LMO3-235ENST00000616247 SGSM2O43147 1006 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 NRDCO43847 1150 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 ATP8B2P98198 1209 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 PTH1RQ03431 593 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 TEX35Q5T0J7 233 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 PREX2Q70Z35 1606 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 RAD50Q92878 1312 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 SDF4Q9BRK5 362 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 FUCA2Q9BTY2 467 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 ATP10DQ9P241 1426 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 IFIT2P09913 472 aaKnown RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 GUCY1B3Q02153 619 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 ARHGAP29Q52LW3 1261 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 LARP1Q6PKG0 1096 aaKnown RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 TMEM87AQ8NBN3 555 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 MORC2Q9Y6X9 1032 aaPredicted RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 URI1O94763 535 aaPredicted RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 PDCP20941 246 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 HNRNPH2P55795 449 aaKnown RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 FAM69CQ0P6D2 419 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 SNW1Q13573 536 aaKnown RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
LMO3-235ENST00000616247 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 ISM2Q6H9L7 571 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 CCDC73Q6ZRK6 1079 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 RHPN1Q8TCX5 695 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 UBXN4Q92575 508 aa7.86□□□□□ -1.15
LMO3-235ENST00000616247 BIN1O00499 593 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 CHL1O00533 1208 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 HOMEZQ8IX15 550 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 ZSCAN31Q96LW9 406 aaPredicted RBP7.85□□□□□ -1.15
LMO3-235ENST00000616247 DNAJC2Q99543 621 aaKnown RBP7.85□□□□□ -1.15
LMO3-235ENST00000616247 SCAND2PQ9GZW5 306 aaPredicted RBP7.85□□□□□ -1.15
LMO3-235ENST00000616247 DDX19AQ9NUU7 478 aaKnown RBP7.85□□□□□ -1.15
LMO3-235ENST00000616247 HYPKQ9NX55 129 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 KINO60870 393 aaKnown RBP7.85□□□□□ -1.15
LMO3-235ENST00000616247 ANXA1P04083 346 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 TMCO3Q6UWJ1 677 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 LRRC8AQ8IWT6 810 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 C10orf67Q8IYJ2 551 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 CCDC34Q96HJ3 373 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 LRRC2Q9BYS8 371 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 ARHGAP31Q2M1Z3 1444 aa7.85□□□□□ -1.15
LMO3-235ENST00000616247 MAP3K4Q9Y6R4 1608 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 RPGRIP1LQ68CZ1 1315 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 CCDC171Q6TFL3 1326 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 PDIA4P13667 645 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 ME1P48163 572 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 SF3A1Q15459 793 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 TXNDC2Q86VQ3 553 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 CLASRPQ8N2M8 674 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 AOPEPQ8N6M6 819 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 IPO4Q8TEX9 1081 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 LEO1Q8WVC0 666 aaPredicted RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 ERO1AQ96HE7 468 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 SIL1Q9H173 461 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 DNAI1Q9UI46 699 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 TPCN1Q9ULQ1 816 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 SPHKAPQ2M3C7 1700 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 TCHHQ07283 1943 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 POLA2Q14181 598 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 EIF4A2Q14240 407 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 CCDC30Q5VVM6 783 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 TMC6Q7Z403 805 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 C14orf37Q86TY3 774 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 ZCCHC17Q9NP64 241 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 SH2B1Q9NRF2 756 aaPredicted RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 ARGLU1Q9NWB6 273 aaPredicted RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 RBM8AQ9Y5S9 174 aaKnown RBP7.84□□□□□ -1.15
LMO3-235ENST00000616247 FAM135BQ49AJ0 1406 aa7.84□□□□□ -1.15
LMO3-235ENST00000616247 JAK2O60674 1132 aa7.84□□□□□ -1.16
LMO3-235ENST00000616247 RBM6P78332 1123 aaKnown RBP7.84□□□□□ -1.16
LMO3-235ENST00000616247 C11orf57Q6ZUT1 292 aaPredicted RBP7.84□□□□□ -1.16
LMO3-235ENST00000616247 PUS7Q96PZ0 661 aaKnown RBP7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms