RNA–Protein interactions for RNA: ENST00000567289.5

SIN3A-208, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2 BASIC

Gene SIN3A, Length 4,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-208ENST00000567289 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 MCM6Q14566 821 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 GTPBP4Q9BZE4 634 aaKnown RBP13.7□□□□□ -0.22
SIN3A-208ENST00000567289 PTPRCP08575 1304 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
SIN3A-208ENST00000567289 GNG11P61952 73 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 SYT10Q6XYQ8 523 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 DNAAF4Q8WXU2 420 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 ACBD3Q9H3P7 528 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
SIN3A-208ENST00000567289 CCDC69A6NI79 296 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 CCDC144CPQ8IYA2 1237 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
SIN3A-208ENST00000567289 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
SIN3A-208ENST00000567289 PHACTR2O75167 634 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 KIF4BQ2VIQ3 1234 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 TAF3Q5VWG9 929 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 NUP133Q8WUM0 1156 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 SNRKQ9NRH2 765 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
SIN3A-208ENST00000567289 CENPHQ9H3R5 247 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 PYCARDQ9ULZ3 195 aa13.69□□□□□ -0.22
SIN3A-208ENST00000567289 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 BRD1O95696 1058 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 SLC3A2P08195 630 aaKnown RBP13.68□□□□□ -0.22
SIN3A-208ENST00000567289 DDX46Q7L014 1031 aaKnown RBP13.68□□□□□ -0.22
SIN3A-208ENST00000567289 MSH6P52701 1360 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 CCP110O43303 1012 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 DHX16O60231 1041 aaKnown RBP13.68□□□□□ -0.22
SIN3A-208ENST00000567289 LIG1P18858 919 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 ELF2Q15723 593 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 ERICH2A1L162 156 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 STX1AQ16623 288 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 C8orf76Q96K31 380 aa13.68□□□□□ -0.22
SIN3A-208ENST00000567289 GTF2E1P29083 439 aaPredicted RBP13.67□□□□□ -0.22
SIN3A-208ENST00000567289 ANAPC15P60006 121 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 VPS53Q5VIR6 699 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 RAD21O60216 631 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 KRT32Q14532 448 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 INTS4Q96HW7 963 aaKnown RBP13.67□□□□□ -0.22
SIN3A-208ENST00000567289 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
SIN3A-208ENST00000567289 RPGRIP1LQ68CZ1 1315 aa13.67□□□□□ -0.22
SIN3A-208ENST00000567289 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 A0A087WWV3 80 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 SLU7O95391 586 aaKnown RBP13.66□□□□□ -0.22
SIN3A-208ENST00000567289 MARCKSP29966 332 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-208ENST00000567289 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
SIN3A-208ENST00000567289 ATP8B2P98198 1209 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 JMYQ8N9B5 988 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 IPO4Q8TEX9 1081 aaKnown RBP13.66□□□□□ -0.22
SIN3A-208ENST00000567289 NRBP1Q9UHY1 535 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 KDM5DQ9BY66 1539 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
SIN3A-208ENST00000567289 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 NEK1Q96PY6 1258 aa13.66□□□□□ -0.22
SIN3A-208ENST00000567289 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 CASQ1P31415 396 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 DNA2P51530 1060 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 C10orf67Q8IYJ2 551 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 OGFRQ9NZT2 677 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 SYCP2Q9BX26 1530 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 HSP90AB3PQ58FF7 597 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 GPATCH11Q8N954 259 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 CBX8Q9HC52 389 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 PLA2R1Q13018 1463 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
SIN3A-208ENST00000567289 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 MAP3K2Q9Y2U5 619 aa13.65□□□□□ -0.22
SIN3A-208ENST00000567289 ATP5J2-PTCD1G3V325 749 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 GOLIM4O00461 696 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 PTCD1O75127 700 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 ERLIN1O75477 346 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 TERF1P54274 439 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 EIF4A2Q14240 407 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 JAKMIP3Q5VZ66 844 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 CCDC12Q8WUD4 166 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 RAI14Q9P0K7 980 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 IFNKQ9P0W0 207 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 INSRP06213 1382 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 WASLO00401 505 aaPredicted RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 NCBP3Q53F19 620 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 EVI5LQ96CN4 794 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 MYD88Q99836 296 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 SRRTQ9BXP5 876 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 ABCC10Q5T3U5 1492 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 CBFA2T2O43439 604 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 EPB41L2O43491 1005 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 EIF3JO75822 258 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
SIN3A-208ENST00000567289 IDH1O75874 414 aaKnown RBP13.64□□□□□ -0.23
SIN3A-208ENST00000567289 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms