RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fmnl2A2APV2 1086 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ptgs1P22437 602 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 TrhQ62361 256 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Mrpl50Q8VDT9 159 aaKnown RBP19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Polr3dQ91WD1 398 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Col16a1Q8BLX7 1580 aa19.38■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ttll7A4Q9F0 912 aa19.37■□□□□ 0.69
Trim28-201ENSMUST00000005705 Wdr78E9PYY5 807 aa19.37■□□□□ 0.69
Trim28-201ENSMUST00000005705 Cnnm1Q0GA42 951 aa19.37■□□□□ 0.69
Trim28-201ENSMUST00000005705 Pkp1P97350 728 aaKnown RBP19.37■□□□□ 0.69
Trim28-201ENSMUST00000005705 Lmbr1lQ9D1E5 489 aa19.37■□□□□ 0.69
Trim28-201ENSMUST00000005705 Frmd3Q8BHD4 595 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Chmp3Q9CQ10 224 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Smarce1O54941 411 aaKnown RBP19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Gsdma3Q5Y4Y6 464 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Zranb3Q6NZP1 1069 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Mdm2P23804 489 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 CebpzP53569 1052 aaKnown RBP19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Snx13Q6PHS6 957 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 NalcnQ8BXR5 1738 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Iffo2Q8R2V2 512 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Mmel1Q9JLI3 765 aa19.36■□□□□ 0.69
Trim28-201ENSMUST00000005705 Prkab2Q6PAM0 271 aa19.35■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ccar2Q8VDP4 922 aaKnown RBP19.35■□□□□ 0.69
Trim28-201ENSMUST00000005705 Adgrb1Q3UHD1 1582 aa19.35■□□□□ 0.69
Trim28-201ENSMUST00000005705 Hvcn1Q3U2S8 269 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ints3Q7TPD0 1041 aaKnown RBP19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 D430041D05RikF6ZGR6 1678 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Zhx1P70121 873 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Kiaa0754Q69ZZ9 979 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 PigbQ9JJQ0 542 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Stx6Q9JKK1 255 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Pus3Q9JI38 481 aa19.34■□□□□ 0.69
Trim28-201ENSMUST00000005705 Msh6P54276 1358 aaKnown RBP19.33■□□□□ 0.69
Trim28-201ENSMUST00000005705 Zfp804bA0A0G2JGH6 1343 aa19.33■□□□□ 0.69
Trim28-201ENSMUST00000005705 Eif4a1P60843 406 aaKnown RBP19.33■□□□□ 0.69
Trim28-201ENSMUST00000005705 BcanQ61361 883 aa19.33■□□□□ 0.69
Trim28-201ENSMUST00000005705 Q9D9S1 216 aa19.33■□□□□ 0.69
Trim28-201ENSMUST00000005705 Ccdc173A0JLY1 547 aa19.33■□□□□ 0.68
Trim28-201ENSMUST00000005705 Cfap73J3QPZ5 306 aa19.33■□□□□ 0.68
Trim28-201ENSMUST00000005705 Atf5O70191 283 aa19.33■□□□□ 0.68
Trim28-201ENSMUST00000005705 Trim30aP15533 496 aa19.33■□□□□ 0.68
Trim28-201ENSMUST00000005705 Utp18Q5SSI6 552 aaKnown RBP19.33■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ifit1Q64282 463 aa19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ccdc178Q8CDV0 866 aa19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 NmiO35309 314 aa19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Tti2Q8BGV4 512 aa19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Cd22P35329 862 aa19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ddx46Q569Z5 1032 aaKnown RBP19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Bicc1Q99MQ1 977 aaKnown RBP19.32■□□□□ 0.68
Trim28-201ENSMUST00000005705 Igsf1Q7TQA1 1317 aa19.31■□□□□ 0.68
Trim28-201ENSMUST00000005705 Rps6ka5Q8C050 863 aa19.31■□□□□ 0.68
Trim28-201ENSMUST00000005705 Mx2Q9WVP9 655 aa19.31■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ugt1a5B2RT14 529 aa19.31■□□□□ 0.68
Trim28-201ENSMUST00000005705 C5P06684 1680 aa19.31■□□□□ 0.68
Trim28-201ENSMUST00000005705 Syt1P46096 421 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Zfp51Q3U4L8 781 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ncbp1Q3UYV9 790 aaKnown RBP19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Bend3Q6PAL0 825 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 GckrQ91X44 587 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Rbm8a2A0A0N4SUH6 174 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Tpd52l1O54818 204 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Grpel1Q99LP6 217 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Gigyf1Q99MR1 1044 aaKnown RBP19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Rbm8aQ9CWZ3 174 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Lekr1B2RVN1 116 aa19.3■□□□□ 0.68
Trim28-201ENSMUST00000005705 Vps54Q5SPW0 977 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ifit2Q64112 472 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Q8C5K5 320 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Mical1Q8VDP3 1048 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Arap3Q8R5G7 1538 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 MpndQ3TV65 487 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Tet3Q8BG87 1668 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 GpkowQ56A08 488 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Adam1aQ60813 791 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Zscan22Q8BGS5 496 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Lmbrd2Q8C561 694 aa19.29■□□□□ 0.68
Trim28-201ENSMUST00000005705 Zbtb21E9Q444 1094 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Cct2P80314 535 aaKnown RBP19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Nxf2Q4ZGD8 691 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Fam170aQ66LM6 333 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Kcnq3Q8K3F6 873 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Clstn1Q9EPL2 979 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Als2Q920R0 1651 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ahnak2E9PYB0 1738 aaKnown RBP19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Lnx1O70263 728 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Amotl1Q9D4H4 968 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Ndufa8Q9DCJ5 172 aa19.28■□□□□ 0.68
Trim28-201ENSMUST00000005705 Adora1Q60612 326 aa19.27■□□□□ 0.68
Trim28-201ENSMUST00000005705 Anapc15P60007 132 aa19.27■□□□□ 0.68
Trim28-201ENSMUST00000005705 CtcfQ61164 736 aaKnown RBP19.27■□□□□ 0.68
Trim28-201ENSMUST00000005705 Kank4Q6P9J5 1016 aa19.27■□□□□ 0.68
Trim28-201ENSMUST00000005705 Brpf3B2KF05 1204 aaKnown RBP19.27■□□□□ 0.67
Trim28-201ENSMUST00000005705 Strn4P58404 760 aa19.27■□□□□ 0.67
Trim28-201ENSMUST00000005705 Ube2hP62257 183 aa19.27■□□□□ 0.67
Trim28-201ENSMUST00000005705 Wdr24Q8CFJ9 790 aa19.27■□□□□ 0.67
Trim28-201ENSMUST00000005705 Slit2Q9R1B9 1521 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Golgb1E9PVZ8 3238 aa19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 SrrtQ99MR6 875 aaKnown RBP19.26■□□□□ 0.67
Trim28-201ENSMUST00000005705 Kif3aP28741 701 aa19.26■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms