RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PRR30Q53SZ7 412 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 XKR9Q5GH70 373 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 BTN2A1Q7KYR7 527 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 CCDC83Q8IWF9 413 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 LMNTD2Q8IXW0 634 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 CPSF7Q8N684 471 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 NOA1Q8NC60 698 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 VANGL1Q8TAA9 524 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 RNF128Q8TEB7 428 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TMEM158Q8WZ71 300 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MRPS31Q92665 395 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 CDKN2AIPNLQ96HQ2 116 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 C3orf30Q96M34 536 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 ZNF385AQ96PM9 386 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TMEM237Q96Q45 408 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 LZTS2Q9BRK4 669 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 RNF150Q9ULK6 438 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 VDAC3Q9Y277 283 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 TDRKHQ9Y2W6 561 aaKnown RBP4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 UBIAD1Q9Y5Z9 338 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MYH10P35580 1976 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 SCN8AQ9UQD0 1980 aa4.34□□□□□ -1.71
HMGB1P23-201ENST00000518743 MYO7BQ6PIF6 2116 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZGRF1Q86YA3 2104 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 OBSL1O75147 1896 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZCWPW2A0A1B0GU75 182 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 FAM90A10PA6NDY2 464 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 TMEM178BH3BS89 294 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 K7EM74 188 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 LRRTM2O43300 516 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 TXNL1O43396 289 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 SNX3O60493 162 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 BCAS2O75934 225 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 GLCEO94923 617 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 WDPCPO95876 746 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PCP11498 1178 aaKnown RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 GM2AP17900 193 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 MPZP25189 248 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 CD27P26842 260 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 HOXA11P31270 313 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 UGT1A5P35504 534 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 KCNJ1P48048 391 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 NME5P56597 212 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PRKCEQ02156 737 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 SRSF4Q08170 494 aaKnown RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PNRC1Q12796 327 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ITGB3BPQ13352 177 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 INAQ16352 499 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 RBBP7Q16576 425 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 SGCBQ16585 318 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 MTX3Q5HYI7 312 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 NDUFAF5Q5TEU4 345 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ANKRD46Q86W74 232 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PTOV1Q86YD1 416 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 CNTN4Q8IWV2 1026 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 AMER3Q8N944 861 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 HMGCLL1Q8TB92 370 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZFAND2BQ8WV99 257 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 SLC13A3Q8WWT9 602 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PRCCQ92733 491 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 RPL36ALQ969Q0 106 aaKnown RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 BIRC7Q96CA5 298 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 C17orf62Q9BQA9 187 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 RPF1Q9H9Y2 349 aaKnown RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 ACKR4Q9NPB9 350 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 CHST11Q9NPF2 352 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 NOX4Q9NPH5 578 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 TMEM30AQ9NV96 361 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 OSER1Q9NX31 292 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 B3GAT1Q9P2W7 334 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 TSPAN16Q9UKR8 245 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 GPR132Q9UNW8 380 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 RPH3AQ9Y2J0 694 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 PTGDR2Q9Y5Y4 395 aa4.33□□□□□ -1.72
HMGB1P23-201ENST00000518743 IGLV5-37A0A075B6J1 123 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 A0A1W2PRB8 838 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 FAM47DPA6NHR8 397 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TMEM150CB9EJG8 249 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 INAFM1C9JVW0 142 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TNFRSF13BO14836 293 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 GP1BAP07359 652 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 OR4Q2P0C623 313 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ALPPL2P10696 532 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 HAPLN1P10915 354 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 AZGP1P25311 298 aaKnown RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 PIK3R1P27986 724 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 CCKBRP32239 447 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ASMTP46597 345 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 SSBP2P81877 361 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 AKAP17AQ02040 695 aaKnown RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 TLE4Q04727 773 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 CACNG1Q06432 222 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 Q0VFX4 171 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZNF155Q12901 538 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 GTF2H2Q13888 395 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 VEZF1Q14119 521 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 DHX34Q14147 1143 aaKnown RBP4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 ZNF77Q15935 545 aa4.32□□□□□ -1.72
HMGB1P23-201ENST00000518743 PHKG1Q16816 387 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms