RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 P2RY2P41231 377 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PCYT1AP49585 367 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RASSF2P50749 326 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPL14P50914 215 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 METAP1P53582 386 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NAGLUP54802 743 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ADPRHP54922 357 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 DNAJB13P59910 316 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPS14P62263 151 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HERVK_113P63132 956 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ROR2Q01974 943 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EGR4Q05215 589 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HSPA14Q0VDF9 509 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CNTN1Q12860 1018 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR4D1Q15615 310 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZRSR2Q15696 482 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PDCD2Q16342 344 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PFKFB4Q16877 469 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 FBXO43Q4G163 708 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM52BQ4KMG9 183 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EOGTQ5NDL2 527 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PLEKHS1Q5SXH7 462 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ZNF678Q5SXM1 525 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HENMT1Q5T8I9 393 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 DOK6Q6PKX4 331 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM207Q6UWW9 146 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 KIAA1324Q6UXG2 1013 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RFLNAQ6ZTI6 216 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EFL1Q7Z2Z2 1120 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ISCA2Q86U28 154 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CUZD1Q86UP6 607 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM200AQ86VY9 491 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TRAPPC5Q8IUR0 188 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CADM3Q8N126 398 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TCAIMQ8N3R3 496 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 DPP10Q8N608 796 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CLDN19Q8N6F1 224 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM217Q8N7C4 229 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EXD3Q8N9H8 876 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 DDHD1Q8NEL9 900 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 OR2T3Q8NH03 318 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 EEF1AKMT1Q8WVE0 214 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 FAM3CQ92520 227 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCT6BQ92526 530 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 GLYATL1Q969I3 302 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 TMEM159Q96B96 161 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 L3HYPDHQ96EM0 354 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 CNDP1Q96KN2 507 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SGCZQ96LD1 299 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 UBXN10Q96LJ8 280 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PPP1R36Q96LQ0 422 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 FOPNLQ96NB1 174 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 BIRC8Q96P09 236 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ATOH8Q96SQ7 321 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SORT1Q99523 831 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 H2AFJQ9BTM1 129 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PHF7Q9BWX1 381 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ERVK-6Q9BXR3 956 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 POLDIP3Q9BY77 421 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SHCBP1LQ9BZQ2 653 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 RSPH9Q9H1X1 276 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRO3102Q9H379 93 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 IL21RQ9HBE5 538 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SEPSECSQ9HD40 501 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PNRC2Q9NPJ4 139 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 HEBP1Q9NRV9 189 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 UTP6Q9NYH9 597 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SELENONQ9NZV5 590 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 SCML1Q9UN30 329 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 NDRG2Q9UN36 371 aaKnown RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 ICKQ9UPZ9 632 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 MTF2Q9Y483 593 aaPredicted RBP3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 OARD1Q9Y530 152 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 FADS3Q9Y5Q0 445 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 PRSS21Q9Y6M0 314 aa3.64□□□□□ -1.83
HMGB3P20-201ENST00000417997 IGLV3-16A0A075B6K0 115 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TCRBV21S2A2A0A5A6 115 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 AGAP14A8MT82 685 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANKRD65E5RJM6 399 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 K7EQS6 105 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 HDAC3O15379 428 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 FFAR2O15552 330 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 VEGFDO43915 354 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 HNRNPCL1O60812 293 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CDK14O94921 469 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 SIX3O95343 332 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TNFRSF6BO95407 300 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MLYCDO95822 493 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 GUCA1CO95843 209 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CATP04040 527 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 RPS17P08708 135 aaKnown RBP3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ANXA5P08758 320 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 ARSBP15848 533 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 TSPAN8P19075 237 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 IMPDH1P20839 514 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 HMOX2P30519 316 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCR7P32248 378 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CA5AP35218 305 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 MAPK9P45984 424 aa3.63□□□□□ -1.83
HMGB3P20-201ENST00000417997 CCR10P46092 362 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms