RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 OR8D2Q9GZM6 311 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 LHPPQ9H008 270 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 LRRN3Q9H3W5 708 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 ABI3Q9P2A4 366 aa16.32■□□□□ 0.2
TRAPPC11-201ENST00000334690 PRKYO43930 277 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ATXN1LP0C7T5 689 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PIM1P11309 404 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ITGA3P26006 1051 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CPOXP36551 454 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 SLC9A3P48764 834 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ARRB1P49407 418 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PRTFDC1Q9NRG1 225 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 NPIPA5E9PKD4 350 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CSTAP01040 98 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ADRB3P13945 408 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CDKL1Q00532 357 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ABHD11Q8NFV4 315 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ACOT12Q8WYK0 555 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 SCGB3A2Q96PL1 93 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 NPIPA1Q9UND3 350 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HSPB11Q9Y547 144 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 C9J4A7 227 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 TEX46H3BTG2 121 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 MTRF1O75570 445 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF432O94892 652 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 OSMP13725 252 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ENDOUP21128 410 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 AGXTP21549 392 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PCGF2P35227 344 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PRAMEF17Q5VTA0 474 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 GTF2IRD2BQ6EKJ0 949 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 GTF2IRD2Q86UP8 949 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR2L3Q8NG85 312 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 SMPDL3BQ92485 455 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 NSMAFQ92636 917 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HSPA12BQ96MM6 686 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HIST1H2AAQ96QV6 131 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 RBP7Q96R05 134 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CPEB1Q9BZB8 566 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 TMEM184CQ9NVA4 438 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 LAMP5Q9UJQ1 280 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 SERTAD3Q9UJW9 196 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 A0A0G2JPF8 293 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HYKKA2RU49 373 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HNRNPCL3B7ZW38 293 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 FOXD2O60548 495 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 APOL3O95236 402 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 HNRNPCL4P0DMR1 293 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CNR2P34972 360 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 CSNK1DP48730 415 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 NCS1P62166 190 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PROKR1Q8TCW9 393 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 MZB1Q8WU39 189 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 RFT1Q96AA3 541 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 TMIGD2Q96BF3 282 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 PELOQ9BRX2 385 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 STUB1Q9UNE7 303 aa16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZFR2Q9UPR6 939 aaKnown RBP16.31■□□□□ 0.2
TRAPPC11-201ENST00000334690 UNC119BA6NIH7 251 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 S100A6P06703 90 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 RNH1P13489 461 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 GABRB3P28472 473 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 MAP2K3P46734 347 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 TMEM107Q6UX40 140 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 CCBE1Q6UXH8 406 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 GDPGP1Q6ZNW5 385 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 PLCZ1Q86YW0 608 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF101Q8IZC7 436 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 HS3ST5Q8IZT8 346 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 METTL25Q8N6Q8 603 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 FAM86B1Q8N7N1 296 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 PAPD5Q8NDF8 572 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 ZNF300Q96RE9 604 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 PELI2Q9HAT8 420 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 GPR83Q9NYM4 423 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 RNASET2O00584 256 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 RBMXL2O75526 392 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 JRKO75564 520 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 SNAPC5O75971 98 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 C5AR1P21730 350 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 MTNR1AP48039 350 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 BMXP51813 675 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 MLLT10P55197 1068 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 KLHDC8AQ8IYD2 350 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 OR8K5Q8NH50 307 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 TRMT2BQ96GJ1 504 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 POLDIP3Q9BY77 421 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 MROH6A6NGR9 719 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 RNGTTO60942 597 aaKnown RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 HSD11B1P28845 292 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 GPR143P51810 404 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 VSX2P58304 361 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 CST6Q15828 149 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 XKRXQ6PP77 449 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■■□ 23
TRAPPC11-201ENST00000334690 UBE2Q1Q7Z7E8 422 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 ANKRD13BQ86YJ7 626 aa16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 INO80EQ8NBZ0 244 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC11-201ENST00000334690 KCNN1Q92952 543 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms