RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 METTL4Q8N3J2 472 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 SIRT6Q8N6T7 355 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 B3GNT7Q8NFL0 401 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 OR14A16Q8NHC5 309 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 ELP5Q8TE02 316 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 AGAP11Q8TF27 550 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 HAS2Q92819 552 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 MTFMTQ96DP5 389 aaKnown RBP17.33■□□□□ 0.36
CHTOP-202ENST00000368687 SSU72Q9NP77 194 aaKnown RBP17.33■□□□□ 0.36
CHTOP-202ENST00000368687 MID1IP1Q9NPA3 183 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 VPS29Q9UBQ0 182 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 VTI1BQ9UEU0 232 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 CLCA3PQ9Y6N3 262 aa17.33■□□□□ 0.36
CHTOP-202ENST00000368687 RP1L1Q8IWN7 2480 aaPredicted RBP17.33■□□□□ 0.36
CHTOP-202ENST00000368687 SPENQ96T58 3664 aaKnown RBP17.32■□□□□ 0.36
CHTOP-202ENST00000368687 A0A1B0GTL3 188 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 SERTM1A2A2V5 107 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 PPP6CO00743 305 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 PROM1O43490 865 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 MYO1DO94832 1006 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 ETHE1O95571 254 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 IFNA16P05015 189 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 PLIN5Q00G26 463 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 SPIN4Q56A73 249 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 SGO1Q5FBB7 561 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 LINC00696Q6ZRV3 163 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 DNAJB14Q8TBM8 379 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 VMP1Q96GC9 406 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 CNDP1Q96KN2 507 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 ALOXE3Q9BYJ1 711 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 PNO1Q9NRX1 252 aaKnown RBP17.32■□□□□ 0.36
CHTOP-202ENST00000368687 ACTL7BQ9Y614 415 aa17.32■□□□□ 0.36
CHTOP-202ENST00000368687 MYO18BQ8IUG5 2567 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 TRAV17A0A0B4J275 112 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 EEDO75530 441 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 SERPINB5P36952 375 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 GSTM5P46439 218 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 CLCN2P51788 898 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 HNRNPFP52597 415 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 MAPK12P53778 367 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 TRA2BP62995 288 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 IGLV3-21P80748 117 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 ZNF169Q14929 603 aaPredicted RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 PCLAFQ15004 111 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 INAQ16352 499 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 ACER2Q5QJU3 275 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 CCNYL2Q5T2Q4 361 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 OR52E8Q6IFG1 317 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 COMMD6Q7Z4G1 85 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 CLNKQ7Z7G1 428 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 C10orf107Q8IVU9 208 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 HORMAD2Q8N7B1 307 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 MORN4Q8NDC4 146 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 TMEM52Q8NDY8 209 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 SUN3Q8TAQ9 357 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 ART5Q96L15 291 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 FAM111AQ96PZ2 611 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 SORBS1Q9BX66 1292 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 MRPL1Q9BYD6 325 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 EML4Q9HC35 981 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 RYDENQ9NUL5 291 aaKnown RBP17.31■□□□□ 0.36
CHTOP-202ENST00000368687 STMN3Q9NZ72 180 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 ATG4BQ9Y4P1 393 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 ASB4Q9Y574 426 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 CLDN16Q9Y5I7 305 aa17.31■□□□□ 0.36
CHTOP-202ENST00000368687 A8MUI8 341 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 TMPRSS11DO60235 418 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 CELA2AP08217 269 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 HNRNPH2P55795 449 aaKnown RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 GALNT1Q10472 559 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 COLEC12Q5KU26 742 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 CEP85LQ5SZL2 805 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 NFAM1Q8NET5 270 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 TCP10LQ8TDR4 215 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 PGM2Q96G03 612 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 RBM18Q96H35 190 aaKnown RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 METTL2AQ96IZ6 378 aaKnown RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 DGAT2Q96PD7 388 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 FAIM2Q9BWQ8 316 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 MFRPQ9BY79 579 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 DEFB126Q9BYW3 111 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 ZBTB20Q9HC78 741 aaPredicted RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 FARSBQ9NSD9 589 aaKnown RBP17.3■□□□□ 0.36
CHTOP-202ENST00000368687 COPS7AQ9UBW8 275 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 NBASA2RRP1 2371 aa17.3■□□□□ 0.36
CHTOP-202ENST00000368687 ASH1LQ9NR48 2969 aaKnown RBP17.29■□□□□ 0.36
CHTOP-202ENST00000368687 OR5H15A6NDH6 313 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 GOLGA6L10A6NI86 522 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 FCHO1O14526 889 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 TM9SF1O15321 606 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 NPHS1O60500 1241 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 LDB3O75112 727 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 CHEK2O96017 543 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 KLK1P06870 262 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 UROSP10746 265 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 GALNSP34059 522 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 STT3AP46977 705 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 CD97P48960 835 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 TNFSF10P50591 281 aa17.29■□□□□ 0.36
CHTOP-202ENST00000368687 ACSM2AQ08AH3 577 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms