RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 HCRTR2O43614 444 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 NARSO43776 548 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ATP6V1G1O75348 118 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 MPC1LP0DKB6 136 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SELENOVP59797 346 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 GTF2IRD2BQ6EKJ0 949 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 GTF2IRD2Q86UP8 949 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TMIEQ8NEW7 156 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ELP5Q8TE02 316 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 NSUN5Q96P11 429 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ATG5Q9H1Y0 275 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 IL21RQ9HBE5 538 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 EXTL2Q9UBQ6 330 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 KCNS2Q9ULS6 477 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 IL3P08700 152 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 PET100P0DJ07 73 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 C1GALT1C1LP0DN25 315 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 GNRHRP30968 328 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 UQCRC1P31930 480 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF84P51523 738 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 AFF1P51825 1210 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 JAG1P78504 1218 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 AIMP2Q13155 320 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 GRHL2Q6ISB3 625 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TRAM1L1Q8N609 369 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 LRRC15Q8TF66 581 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 OTUB2Q96DC9 234 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 OR2M4Q96R27 311 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 PIP5K1AQ99755 562 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SARDHQ9UL12 918 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 PTGDR2Q9Y5Y4 395 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 MYOCOSA0A1B0GUC4 107 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TCRBV21S2A2A0A5A6 115 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 TSPAN6O43657 245 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SNAPC5O75971 98 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 GTF2F2P13984 249 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 CD1DP15813 335 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 NR0B1P51843 470 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 ABRAXAS2Q15018 415 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 HSD17B12Q53GQ0 312 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 C6orf136Q5SQH8 315 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 PLEKHG7Q6ZR37 379 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 HDAC2Q92769 488 aaKnown RBP11.1□□□□□ -0.63
LAMA4-201ENST00000230538 SIX4Q9UIU6 781 aa11.1□□□□□ -0.63
LAMA4-201ENST00000230538 FAM72CH0Y354 149 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 PIRO00625 290 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FAM189A1O60320 539 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RP2O75695 350 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 EPOP01588 193 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ASGR2P07307 311 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 HOXD8P13378 290 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RBMXP38159 391 aaKnown RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 KCNC1P48547 511 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 EFR3AQ14156 821 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 VMACQ2NL98 169 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 BTBD16Q32M84 506 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FAM72AQ5TYM5 149 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FAM72DQ6L9T8 149 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 FAM72BQ86X60 149 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 DOHHQ9BU89 302 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF226Q9NYT6 803 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZFR2Q9UPR6 939 aaKnown RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ST14Q9Y5Y6 855 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF487B1APH4 448 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RFPL1O75677 317 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CKMT1AP12532 417 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SLC9A3P48764 834 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 DIO3P55073 304 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ST3GAL4Q11206 333 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SLAMF1Q13291 335 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 MRPL49Q13405 166 aaKnown RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GAS6Q14393 721 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ATXN7L3Q14CW9 347 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SGCAQ16586 387 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SLC35G1Q2M3R5 365 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 ZNF792Q3KQV3 632 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SLC27A4Q6P1M0 643 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 LAS2Q8IYD9 372 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 JPH3Q8WXH2 748 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RDH12Q96NR8 316 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 TRIB3Q96RU7 358 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 DHDHQ9UQ10 334 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 OR6C74A6NCV1 312 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 TYROBPO43914 113 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CSTAP01040 98 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 PFKMP08237 780 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GRB7Q14451 532 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 C10orf62Q5T681 223 aaPredicted RBP11.09□□□□□ -0.63
LAMA4-201ENST00000230538 XKR5Q6UX68 686 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SGIP1Q9BQI5 828 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 SCO2O43819 266 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 RAD51DO75771 328 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 GKN3PP0CG01 181 aa11.09□□□□□ -0.63
LAMA4-201ENST00000230538 LRIT3Q3SXY7 679 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms