RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 C12orf65Q9H3J6 166 aaKnown RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 GSTO2Q9H4Y5 243 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 ROPN1Q9HAT0 212 aaPredicted RBP12.09□□□□□ -0.47
COL5A1-206ENST00000465877 MMP25Q9NPA2 562 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 KCMF1Q9P0J7 381 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 PHF11Q9UIL8 331 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 MID2Q9UJV3 735 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 FBXW2Q9UKT8 454 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 GRID1Q9ULK0 1009 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 B3GNT3Q9Y2A9 372 aa12.09□□□□□ -0.47
COL5A1-206ENST00000465877 CNTRLQ7Z7A1 2325 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 A0A0A6YYD5 115 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 BLACEA4D250 179 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 EEDO75530 441 aaKnown RBP12.08□□□□□ -0.48
COL5A1-206ENST00000465877 MLYCDO95822 493 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 CPN2P22792 545 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 BSGP35613 385 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 MLLT10P55197 1068 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 HNRNPH2P55795 449 aaKnown RBP12.08□□□□□ -0.48
COL5A1-206ENST00000465877 ZNF33BQ06732 778 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 PCLAFQ15004 111 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 TERF2Q15554 542 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 B3GNTL1Q67FW5 361 aaPredicted RBP12.08□□□□□ -0.48
COL5A1-206ENST00000465877 CYP20A1Q6UW02 462 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 Q6ZS92 163 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 FRMD7Q6ZUT3 714 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 CDYL2Q8N8U2 506 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 MYRIPQ8NFW9 859 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 M1APQ8TC57 530 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 AGAP11Q8TF27 550 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 SELENOMQ8WWX9 145 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 CNDP1Q96KN2 507 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 HBEGFQ99075 208 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 SLC29A3Q9BZD2 475 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 KCNK13Q9HB14 408 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 ADAP2Q9NPF8 381 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 SLAMF7Q9NQ25 335 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 FARSBQ9NSD9 589 aaKnown RBP12.08□□□□□ -0.48
COL5A1-206ENST00000465877 LYARQ9NX58 379 aaKnown RBP12.08□□□□□ -0.48
COL5A1-206ENST00000465877 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 SNX6Q9UNH7 406 aa12.08□□□□□ -0.48
COL5A1-206ENST00000465877 NBASA2RRP1 2371 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 EXPH5Q8NEV8 1989 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 TMPRSS11DO60235 418 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 LDB3O75112 727 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 PRKRAO75569 313 aaKnown RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 MYO1DO94832 1006 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 PDYNP01213 254 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 TUBBP07437 444 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 NR2F6P10588 404 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 PPP2R1BP30154 601 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 HMOX2P30519 316 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 DEKP35659 375 aaKnown RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 BUD31P41223 144 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 HTR6P50406 440 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 ARG2P78540 354 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 ZNF844Q08AG5 666 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 SLAMF1Q13291 335 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 KRT71Q3SY84 523 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 PRR30Q53SZ7 412 aaPredicted RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 SGO1Q5FBB7 561 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 ABHD17BQ5VST6 288 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 CUZD1Q86UP6 607 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 IQCKQ8N0W5 287 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 KIF2BQ8N4N8 673 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 CCNYL1Q8N7R7 359 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 BANPQ8N9N5 519 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 CPT1CQ8TCG5 803 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 KCNA7Q96RP8 456 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 TMEM109Q9BVC6 243 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 MRPL1Q9BYD6 325 aaKnown RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 RNF32Q9H0A6 362 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 DDX31Q9H8H2 851 aaKnown RBP12.07□□□□□ -0.48
COL5A1-206ENST00000465877 BRF2Q9HAW0 419 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 OXSMQ9NWU1 459 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 TEKT2Q9UIF3 430 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 SLC12A4Q9UP95 1085 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 PCDHGA10Q9Y5H3 936 aa12.07□□□□□ -0.48
COL5A1-206ENST00000465877 DYTNA2CJ06 578 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 A8MUA0 341 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 A8MUI8 341 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 MANBAO00462 879 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 CTNSO60931 367 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ESRRBO95718 433 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 F10P00742 488 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 KRT6AP02538 564 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 GBAP04062 536 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 KRT6BP04259 564 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ENO1P06733 434 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 KRT6CP48668 564 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 PKNOX1P55347 436 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 TAS2R50P59544 299 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 DNAJB13P59910 316 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 NAA20P61599 178 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 STX4Q12846 297 aa12.06□□□□□ -0.48
COL5A1-206ENST00000465877 CSTF3Q12996 717 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ZNF169Q14929 603 aaPredicted RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 ELAVL1Q15717 326 aaKnown RBP12.06□□□□□ -0.48
COL5A1-206ENST00000465877 LIPMQ5VYY2 423 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms