RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 DRD2P14416 443 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 ALOX12P18054 663 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 ACTR3P61158 418 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 SQSTM1Q13501 440 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 GTDC1Q4AE62 458 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 PERM1Q5SV97 790 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 NDUFAF5Q5TEU4 345 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 USP53Q70EK8 1073 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 C10orf67Q8IYJ2 551 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 ARHGEF39Q8N4T4 335 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 FAM47BQ8NA70 645 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 FAM156AQ8NDB6 213 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 NAT6Q93015 286 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 ZNF285Q96NJ3 590 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 PANX1Q96RD7 426 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 SERINC2Q96SA4 455 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 SOHLH2Q9NX45 425 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 LYARQ9NX58 379 aaKnown RBP19.72■□□□□ 0.75
PNKP-203ENST00000593946 TMEM9Q9P0T7 183 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 KLHL3Q9UH77 587 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 MRPS2Q9Y399 296 aaKnown RBP19.72■□□□□ 0.75
PNKP-203ENST00000593946 L3MBTL1Q9Y468 752 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 SLC22A7Q9Y694 548 aa19.72■□□□□ 0.75
PNKP-203ENST00000593946 CPED1A4D0V7 1026 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 CASC3O15234 703 aaKnown RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 GUCY1B2O75343 617 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 CTSBP07858 339 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 EFNA1P20827 205 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 MSX2P35548 267 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 PRTGQ2VWP7 1150 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 PROX2Q3B8N5 592 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 DEFB134Q4QY38 66 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 RUNDC3AQ59EK9 446 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 FBXW10Q5XX13 1052 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 PRSS42Q7Z5A4 293 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 CIDECQ96AQ7 238 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 FAIM2Q9BWQ8 316 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 TAS2R7Q9NYW3 318 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 EHD3Q9NZN3 535 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 PLCL2Q9UPR0 1127 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 ATG4BQ9Y4P1 393 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 A0A1W2PR48 441 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 TXNDC9O14530 226 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 TCN1P20061 433 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 ZNF10P21506 573 aaPredicted RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 ALDH9A1P49189 494 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 EEFSECP57772 596 aaKnown RBP19.71■□□□□ 0.75
PNKP-203ENST00000593946 MTPNP58546 118 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 SELPLGQ14242 412 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 LAIR1Q6GTX8 287 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 ASB9Q96DX5 294 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 GBP5Q96PP8 586 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 NUDT22Q9BRQ3 303 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 STARD5Q9NSY2 213 aa19.71■□□□□ 0.75
PNKP-203ENST00000593946 SCN2AQ99250 2005 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 PROM1O43490 865 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 GSNP06396 782 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 CKMT1AP12532 417 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 DDX5P17844 614 aaKnown RBP19.7■□□□□ 0.74
PNKP-203ENST00000593946 MS4A2Q01362 244 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 TRIM25Q14258 630 aaKnown RBP19.7■□□□□ 0.74
PNKP-203ENST00000593946 NATD1Q8N6N6 113 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 GOT1L1Q8NHS2 421 aaPredicted RBP19.7■□□□□ 0.74
PNKP-203ENST00000593946 PHF12Q96QT6 1004 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 MAPKAP1Q9BPZ7 522 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 CPPED1Q9BRF8 314 aaPredicted RBP19.7■□□□□ 0.74
PNKP-203ENST00000593946 ALG2Q9H553 416 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 IKZF5Q9H5V7 419 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 GMPR2Q9P2T1 348 aaKnown RBP19.7■□□□□ 0.74
PNKP-203ENST00000593946 FBXW2Q9UKT8 454 aa19.7■□□□□ 0.74
PNKP-203ENST00000593946 LNP1A1A4G5 178 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 ACOT8O14734 319 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 ANP32DO95626 131 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 AIFM1O95831 613 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 ZCCHC18P0CG32 403 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 FRKP42685 505 aaPredicted RBP19.69■□□□□ 0.74
PNKP-203ENST00000593946 GSK3BP49841 420 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 ATXN3P54252 364 aaPredicted RBP19.69■□□□□ 0.74
PNKP-203ENST00000593946 HSD11B2P80365 405 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 LIPEQ05469 1076 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 PRSS41Q7RTY9 318 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 PDSS2Q86YH6 399 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 KLHL6Q8WZ60 621 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 UCN3Q969E3 161 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 AURKBQ96GD4 344 aaPredicted RBP19.69■□□□□ 0.74
PNKP-203ENST00000593946 SH3GL1Q99961 368 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 KCMF1Q9P0J7 381 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 C5AR2Q9P296 337 aa19.69■□□□□ 0.74
PNKP-203ENST00000593946 COL5A1P20908 1838 aaPredicted RBP19.69■□□□□ 0.74
PNKP-203ENST00000593946 C1orf226A1L170 272 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 B3GALT2O43825 422 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 GALR3O60755 368 aaPredicted RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 DNAJA2O60884 412 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 CPSF4O95639 269 aaKnown RBP19.68■□□□□ 0.74
PNKP-203ENST00000593946 IL1RNP18510 177 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 HBA1P69905 142 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 KMT5CQ86Y97 462 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 SLC41A2Q96JW4 573 aa19.68■□□□□ 0.74
PNKP-203ENST00000593946 PHF11Q9UIL8 331 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms