RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 SNUPNO95149 360 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 SYF2O95926 243 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 RAP2AP10114 183 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 MYL2P10916 166 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CEACAM1P13688 526 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CPA3P15088 417 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 FPR1P21462 350 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ATP5F1P24539 256 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 HRH2P25021 359 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 IMPA1P29218 277 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 BDKRB1P46663 353 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CAPZBP47756 277 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 SLC6A9P48067 706 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PIK3CGP48736 1102 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PNLIPRP1P54315 467 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PRKAA2P54646 552 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 DNAJB13P59910 316 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ABATP80404 500 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 E2F1Q01094 437 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 TAP2Q03519 686 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 RELAQ04206 551 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 MGAT2Q10469 447 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PRKG2Q13237 762 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PCBP2Q15366 365 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 N4BP2L1Q5TBK1 243 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CAPN13Q6MZZ7 669 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ARMC6Q6NXE6 501 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 DUS1LQ6P1R4 473 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 AGTRAPQ6RW13 159 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ZYG11AQ6WRX3 759 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 EFL1Q7Z2Z2 1120 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 OOSP2Q86WS3 158 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 SLC22A9Q8IVM8 553 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 FBXO39Q8N4B4 442 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 LMNTD1Q8N9Z9 388 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 OR56A3Q8NH54 315 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 DENND1AQ8TEH3 1009 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 RHBDF1Q96CC6 855 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 L3HYPDHQ96EM0 354 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ZDHHC12Q96GR4 267 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 HAUS8Q9BT25 410 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CAPS2Q9BXY5 557 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PITPNM3Q9BZ71 974 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CHRNA10Q9GZZ6 450 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CCDC177Q9NQR7 707 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 NKIRAS1Q9NYS0 192 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 CD274Q9NZQ7 290 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM216Q9P0N5 145 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 STOX2Q9P2F5 926 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 PTBP2Q9UKA9 531 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 IKZF3Q9UKT9 509 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 ICKQ9UPZ9 632 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 STK38LQ9Y2H1 464 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 TDRKHQ9Y2W6 561 aaKnown RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 KLK4Q9Y5K2 254 aa5.51□□□□□ -1.53
SCAF11-213ENST00000550629 TP53BP1Q12888 1972 aaPredicted RBP5.51□□□□□ -1.53
SCAF11-213ENST00000550629 MN1Q10571 1320 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PIEZO1Q92508 2521 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 GON4LQ3T8J9 2241 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TMEM120BA0PK00 339 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PIPSLA2A3N6 862 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CPED1A4D0V7 1026 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 OR6C74A6NCV1 312 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SUPT3HB4E1H0 165 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 G3V2L1 256 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 H3BQF6 201 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TMX2-CTNND1H3BSU7 103 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 UBXN8O00124 270 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SUPT3HO75486 399 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 STK16O75716 305 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CCNDBP1O95273 360 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CPNE6O95741 557 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TOP3BO95985 862 aaKnown RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 C9P02748 559 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PROS1P07225 676 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CHRM5P08912 532 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SBK3P0C264 359 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ANKRD34CP0C6C1 535 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 DHRS4L1P0CG22 281 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 GFAPP14136 432 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 IMPDH1P20839 514 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CD1CP29017 333 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ALDH4A1P30038 563 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 RPA3P35244 121 aaPredicted RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SERPINB5P36952 375 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SLC6A12P48065 614 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 ACADVLP49748 655 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 HERVK_113P63132 956 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PRKAA1Q13131 559 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TRIP6Q15654 476 aaKnown RBP5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PDK4Q16654 411 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 PFKFB4Q16877 469 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SLC5A12Q1EHB4 618 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CCSMST1Q4G0I0 132 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 TTMPQ5BVD1 217 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 GUSBP11Q6P575 273 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 CDHR3Q6ZTQ4 885 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 LRRC70Q7Z2Q7 622 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 KMT5CQ86Y97 462 aa5.5□□□□□ -1.53
SCAF11-213ENST00000550629 SFTPA2Q8IWL1 248 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms