RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 FAM87AP0C7U9 286 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 ICAM2P13598 275 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 TLX1P31314 330 aaPredicted RBP14.12□□□□□ -0.15
RNF4-210ENST00000508235 SERPINB4P48594 390 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 CCL11P51671 97 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 RHAGQ02094 409 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 CYP20A1Q6UW02 462 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 ZNF793Q6ZN11 406 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 CPEB2Q7Z5Q1 589 aaKnown RBP14.12□□□□□ -0.15
RNF4-210ENST00000508235 TMEM151BQ8IW70 566 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 GOLGA6L1Q8N7Z2 621 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 PPP1R14CQ8TAE6 165 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 PTCHD1Q96NR3 888 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 TUBB6Q9BUF5 446 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 MECRQ9BV79 373 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 VIPAS39Q9H9C1 493 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 FARSBQ9NSD9 589 aaKnown RBP14.12□□□□□ -0.15
RNF4-210ENST00000508235 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 PCDHGA9Q9Y5G4 932 aaKnown RBP14.12□□□□□ -0.15
RNF4-210ENST00000508235 CELSR3Q9NYQ7 3312 aa14.12□□□□□ -0.15
RNF4-210ENST00000508235 IGHV1-45A0A0A0MS14 117 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 SERTM1A2A2V5 107 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 CEACAM4O75871 244 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 SNUPNO95149 360 aaKnown RBP14.11□□□□□ -0.15
RNF4-210ENST00000508235 ETHE1O95571 254 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 CHEK2O96017 543 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 UROSP10746 265 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 COX6A1P12074 109 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 CPN2P22792 545 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 BSGP35613 385 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 BUD31P41223 144 aaPredicted RBP14.11□□□□□ -0.15
RNF4-210ENST00000508235 SLC18A1P54219 525 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 SOX8P57073 446 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 ACTN3Q08043 901 aaPredicted RBP14.11□□□□□ -0.15
RNF4-210ENST00000508235 CHAF1BQ13112 559 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 SLC13A2Q13183 592 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 AGBL2Q5U5Z8 902 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 CPZQ66K79 652 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 ANKRD37Q7Z713 158 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 GPR180Q86V85 440 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 METTL4Q8N3J2 472 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 C9orf43Q8TAL5 461 aaPredicted RBP14.11□□□□□ -0.15
RNF4-210ENST00000508235 C8orf44Q96CB5 159 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 SLC25A23Q9BV35 468 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 TRIM55Q9BYV6 548 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 ZNF700Q9H0M5 742 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 PRTFDC1Q9NRG1 225 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 KCMF1Q9P0J7 381 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 TIMM22Q9Y584 194 aa14.11□□□□□ -0.15
RNF4-210ENST00000508235 PCSK5Q92824 1860 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 A0A0A6YYD5 115 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 FAM227AF5H4B4 570 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 CYR61O00622 381 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 GUCY1B2O75343 617 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 DNAJB5O75953 348 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ALPPP05187 535 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 NEFHP12036 1026 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ITGA3P26006 1051 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 PPP2R1BP30154 601 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 MAGOHP61326 146 aaKnown RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 EEF1A2Q05639 463 aaKnown RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 EXT1Q16394 746 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 SPIN4Q56A73 249 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ARL13AQ5H913 290 aaPredicted RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 TCTN3Q6NUS6 607 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 PCSK4Q6UW60 755 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 RIPOR1Q6ZS17 1223 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 CUZD1Q86UP6 607 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 SCUBE1Q8IWY4 988 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 KBTBD2Q8IY47 623 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 GALNT16Q8N428 558 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 EFCAB3Q8N7B9 438 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 FAM47BQ8NA70 645 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 SLC39A7Q92504 469 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ZBTB9Q96C00 473 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 TLCD1Q96CP7 247 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ABHD17AQ96GS6 310 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 LPAR4Q99677 370 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 MAPKAP1Q9BPZ7 522 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 SORBS1Q9BX66 1292 aaKnown RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 ZNF717Q9BY31 904 aaPredicted RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 MRPL1Q9BYD6 325 aaKnown RBP14.1□□□□□ -0.15
RNF4-210ENST00000508235 WDR41Q9HAD4 459 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 ZNF160Q9HCG1 818 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 GPR83Q9NYM4 423 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 NKIRAS1Q9NYS0 192 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 FBXW2Q9UKT8 454 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 PCDHGB7Q9Y5F8 929 aa14.1□□□□□ -0.15
RNF4-210ENST00000508235 IGKV3D-11A0A0A0MRZ8 115 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TCRBV16S1A1N1A0A5B0 115 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 TMEM120BA0PK00 339 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 EIF4E1BA6NMX2 242 aaKnown RBP14.09□□□□□ -0.15
RNF4-210ENST00000508235 TMEM114B3SHH9 223 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 AZIN1O14977 448 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 CTNSO60931 367 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 EEDO75530 441 aaKnown RBP14.09□□□□□ -0.15
RNF4-210ENST00000508235 FGF4P08620 206 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 FAM58BPP0C7Q3 252 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 DHRS4L1P0CG22 281 aa14.09□□□□□ -0.15
RNF4-210ENST00000508235 MAOAP21397 527 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms