RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 KIF19Q2TAC6 998 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF829Q3KNS6 432 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 NADK2Q4G0N4 442 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ATAD3BQ5T9A4 648 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CST9LP1Q5W188 147 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CENPPQ6IPU0 288 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CGB2Q6NT52 195 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GTF2H2CQ6P1K8 395 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ALKBH5Q6P6C2 394 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF530Q6P9A1 599 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RFWD3Q6PCD5 774 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RBPMS2Q6ZRY4 209 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RAPH1Q70E73 1250 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GPR141Q7Z602 305 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 NT5DC3Q86UY8 548 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 KMT5CQ86Y97 462 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRIML2Q8N7C3 387 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 XXYLT1Q8NBI6 393 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR6J1Q8NGC5 347 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 SUN5Q8TC36 379 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 CHPT1Q8WUD6 406 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 THOC3Q96J01 351 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 DNAJC1Q96KC8 554 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM84BQ96KN1 310 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR6C1Q96RD1 312 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GPATCH1Q9BRR8 931 aaKnown RBP4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GPR88Q9GZN0 384 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 C1orf21Q9H246 121 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 SEMA6AQ9H2E6 1030 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TRABDQ9H4I3 376 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 PARVGQ9HBI0 331 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 HHATLQ9HCP6 504 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 S100A14Q9HCY8 104 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 HMG20AQ9NP66 347 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 INIPQ9NRY2 104 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 PNPLA3Q9NST1 481 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 OLAHQ9NV23 265 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 FKBP14Q9NWM8 211 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 HACD3Q9P035 362 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 TMEM9Q9P0T7 183 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 MALT1Q9UDY8 824 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RABL2BQ9UNT1 228 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 DLGAP4Q9Y2H0 992 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 SNX24Q9Y343 169 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 N6AMT1Q9Y5N5 214 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 RIC1Q4ADV7 1423 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 NFASCO94856 1347 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 FLT1P17948 1338 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 GLI3P10071 1580 aa4.19□□□□□ -1.74
HMGB1P16-201ENST00000447155 COL1A1P02452 1464 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 HEG1Q9ULI3 1381 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 A0A087X0T9 212 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 IQANK1A0A1B0GTG1 560 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 EDDM13A0A1B0GTR0 161 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 GTPBP10A4D1E9 387 aaKnown RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ARHGAP42A6NI28 874 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 CENPBD1B2RD01 187 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 H0YC42 278 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 H0YJX3 145 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 EIF3DO15371 548 aaKnown RBP eCLIP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 KLRC4O43908 158 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 TSPAN1O60635 241 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 WDR1O75083 606 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 MED24O75448 989 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZBTB11O95625 1053 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 STAMBPO95630 424 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 OXSR1O95747 527 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 UQCRFS1P1P0C7P4 283 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM228BP0C875 321 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 SMIM18P0DKX4 95 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 T-ENOLP0DO92 83 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 HLA-DOBP13765 273 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 VCLP18206 1134 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 DNASE1P24855 282 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 CTNNA2P26232 953 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 GNA11P29992 359 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 GABRA5P31644 462 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 S100A5P33763 92 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC1A1P43005 524 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZNF41P51814 821 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ART1P52961 327 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 AQP4P55087 323 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 FOXG1P55316 489 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 TPD52P55327 224 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 NLRP11P59045 1033 aaKnown RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 NANOS2P60321 138 aaKnown RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 BASP1P80723 227 aaKnown RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZXDBP98169 803 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 FCHO2Q0JRZ9 810 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 WASHC5Q12768 1159 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 DPYSQ14117 519 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 SLC15A2Q16348 729 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 EXOC3L4Q17RC7 722 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 ZC2HC1CQ53FD0 456 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 GCNT6Q5T4J0 391 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 METTL21CQ5VZV1 264 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 KRT39Q6A163 491 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR7E24Q6IFN5 339 aa4.18□□□□□ -1.74
HMGB1P16-201ENST00000447155 TTC23LQ6PF05 361 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms