RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	FAM114A1	Q8IWE2	563 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	CNTN4	Q8IWV2	1026 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	HDDC3	Q8N4P3	179 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	RASGEF1A	Q8N9B8	481 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	POC1A	Q8NBT0	407 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	ANKRD20A12P	Q8NF67	263 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	VANGL1	Q8TAA9	524 aa	Predicted RBP	5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	RNF128	Q8TEB7	428 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	CKAP2	Q8WWK9	683 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	BCL2L2	Q92843	193 aa	Predicted RBP	5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	C5orf30	Q96GV9	206 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	PRRG4	Q9BZD6	226 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	LRRCC1	Q9C099	1032 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	C1orf21	Q9H246	121 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	DCTPP1	Q9H773	170 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891		Q9N2K0	584 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	GSN-AS1	Q9NRJ2	163 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	ECHDC1	Q9NTX5	307 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	SPHK1	Q9NYA1	384 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	CYP39A1	Q9NYL5	469 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	LRWD1	Q9UFC0	647 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	KCNG2	Q9UJ96	466 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	POU2F3	Q9UKI9	436 aa		5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	BAZ2B	Q9UIF8	2168 aa	Known RBP	5.25	□□□□□ -1.57
NRXN1-223	ENST00000625891	MYO7A	Q13402	2215 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ILVBL	A1L0T0	632 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	SYCE3	A1L190	88 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	PLG	P00747	810 aa	Predicted RBP	5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	CA3	P07451	260 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	HAPLN1	P10915	354 aa	Predicted RBP	5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	MT3	P25713	68 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	TDO2	P48775	406 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	DLX5	P56178	289 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	NME5	P56597	212 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	DEFB103A	P81534	67 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	IL1RL1	Q01638	556 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ZRSR1	Q15695	479 aa	Known RBP	5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ZNF672	Q499Z4	452 aa	Predicted RBP	5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	NDUFAF5	Q5TEU4	345 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	LRRC38	Q5VT99	294 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	C9orf139	Q6ZV77	190 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	MIER3	Q7Z3K6	550 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ARHGAP22	Q7Z5H3	698 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	SMIM29	Q86T20	159 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	SLC9B2	Q86UD5	537 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	CCDC83	Q8IWF9	413 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ARHGAP24	Q8N264	748 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	AMER3	Q8N944	861 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	THAP8	Q8NA92	274 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	GMCL1P1	Q8NEA9	526 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	SEPT1	Q8WYJ6	367 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	SGF29	Q96ES7	293 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	CFAP36	Q96G28	342 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	RAD9A	Q99638	391 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	VN1R1	Q9GZP7	353 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	MIS12	Q9H081	205 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ABCG8	Q9H221	673 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	FKRP	Q9H9S5	495 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	DNAJC4	Q9NNZ3	241 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ACKR4	Q9NPB9	350 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	HPF1	Q9NWY4	346 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	MAD2L2	Q9UI95	211 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	DDX19B	Q9UMR2	479 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	MTF2	Q9Y483	593 aa	Predicted RBP	5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	PLIN4	Q96Q06	1357 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	DMD	P11532	3685 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	COL4A6	Q14031	1691 aa		5.24	□□□□□ -1.57
NRXN1-223	ENST00000625891	ELP1	O95163	1332 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	NEDD4	P46934	1319 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	USP34	Q70CQ2	3546 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	LAMA4	Q16363	1823 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	KRT87P	A6NCN2	255 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	SLC9B1P1	A6NJY1	282 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	CACNB4	O00305	520 aa	Predicted RBP	5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	TTI1	O43156	1089 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	BUB3	O43684	328 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	KRT86	O43790	486 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PRPSAP2	O60256	369 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	AKAP3	O75969	853 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	KRT36	O76013	467 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PDE9A	O76083	593 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	TFAP2A	P05549	437 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	F7	P08709	466 aa	Predicted RBP	5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	DES	P17661	470 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	CALML3	P27482	149 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PSMB4	P28070	264 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	NOV	P48745	357 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PDX1	P52945	283 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	SLC12A3	P55017	1021 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	CX3CL1	P78423	397 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	RPL36A	P83881	106 aa	Known RBP	5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	ARHGAP1	Q07960	439 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	VEZF1	Q14119	521 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	KRT81	Q14533	505 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PPA1	Q15181	289 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	SGCB	Q16585	318 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	PTGIS	Q16647	500 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	DUOXA1	Q1HG43	343 aa		5.23	□□□□□ -1.57
NRXN1-223	ENST00000625891	LACTB2	Q53H82	288 aa	Predicted RBP	5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms