RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 QSOX2Q6ZRP7 698 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 LINC00696Q6ZRV3 163 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 UBE3DQ7Z6J8 389 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 LCA5Q86VQ0 697 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TDRPQ86YL5 185 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 HPS6Q86YV9 775 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 TMEM151AQ8N4L1 468 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 SIRT6Q8N6T7 355 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 L3MBTL4Q8NA19 623 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PLPP5Q8NEB5 264 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 OR2W6PQ8NHA6 318 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 ZNF483Q8TF39 744 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 AENQ8WTP8 325 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 REPS1Q96D71 796 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 CMTM7Q96FZ5 175 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 MAGEB10Q96LZ2 347 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PTCHD1Q96NR3 888 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 CSF3RQ99062 836 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 WDR77Q9BQA1 342 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 SORBS1Q9BX66 1292 aaKnown RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 NPLQ9BXD5 320 aaPredicted RBP11.12□□□□□ -0.63
RAB5C-204ENST00000547517 OR51B5Q9H339 312 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 EPS8L2Q9H6S3 715 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 ZBTB26Q9HCK0 441 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PRDM9Q9NQV7 894 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PTGFRNQ9P2B2 879 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 PCDHGA11Q9Y5H2 935 aa11.12□□□□□ -0.63
RAB5C-204ENST00000547517 H0YIV9 168 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 PRMT3O60678 531 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 GLRA3O75311 464 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 SORBS2O94875 1100 aaKnown RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 GSTA1P08263 222 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 PIK3CBP42338 1070 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 NEK2P51955 445 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 HNRNPFP52597 415 aaKnown RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 MLLT10P55197 1068 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CDH13P55290 713 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 LIM2P55344 173 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 HERVK_113P63132 956 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ACTN3Q08043 901 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ERCC6LQ2NKX8 1250 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CRB2Q5IJ48 1285 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 TTC19Q6DKK2 380 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 JMJD6Q6NYC1 403 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 WDR93Q6P2C0 686 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 EMBQ6PCB8 327 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ISLR2Q6UXK2 745 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 RIPOR1Q6ZS17 1223 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CHSY3Q70JA7 882 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CYP4X1Q8N118 509 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ZADH2Q8N4Q0 377 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 TMEM52Q8NDY8 209 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 SRFBP1Q8NEF9 429 aaKnown RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ARMC2Q8NEN0 867 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ADAMTS18Q8TE60 1221 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 PPP4R1Q8TF05 950 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 IMMP1LQ96LU5 166 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 TMEM237Q96Q45 408 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 LPAR4Q99677 370 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CENPKQ9BS16 269 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 TBCDQ9BTW9 1192 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ERVK-6Q9BXR3 956 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ROGDIQ9GZN7 287 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ILKAPQ9H0C8 392 aaPredicted RBP11.11□□□□□ -0.63
RAB5C-204ENST00000547517 NECTIN3Q9NQS3 549 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 PRDM7Q9NQW5 492 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 ADGRE2Q9UHX3 823 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 DAPP1Q9UN19 280 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 CSAG2Q9Y5P2 127 aa11.11□□□□□ -0.63
RAB5C-204ENST00000547517 IGKV3D-11A0A0A0MRZ8 115 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 A0A1B0GTL3 188 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 TTLL8A6PVC2 850 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 DLX3O60479 287 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 CDH16O75309 829 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 SUPT7LO94864 414 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 OTCP00480 354 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 ICAM2P13598 275 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 HIST1H1TP22492 207 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-204ENST00000547517 ATP5F1P24539 256 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-204ENST00000547517 ATP5A1P25705 553 aaKnown RBP11.1□□□□□ -0.63
RAB5C-204ENST00000547517 AP2B1P63010 937 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 IFFO1Q0D2I5 559 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 SLC13A2Q13183 592 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 MFAP5Q13361 173 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 RASA2Q15283 850 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 EXT1Q16394 746 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 AP5B1Q2VPB7 878 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 PRR30Q53SZ7 412 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-204ENST00000547517 FAM219BQ5XKK7 198 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 B3GNTL1Q67FW5 361 aaPredicted RBP11.1□□□□□ -0.63
RAB5C-204ENST00000547517 PLAG1Q6DJT9 500 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 LETMD1Q6P1Q0 360 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 IGFL3Q6UXB1 125 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 CLNKQ7Z7G1 428 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 C4orf33Q8N1A6 199 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 ACOT4Q8N9L9 421 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 Q8NA96 180 aa11.1□□□□□ -0.63
RAB5C-204ENST00000547517 OR4F6Q8NGB9 312 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms