RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 POPDC3Q9HBV1 291 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 GRHL1Q9NZI5 618 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 COQ3Q9NZJ6 369 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 TNFRSF10DQ9UBN6 386 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 RNF14Q9UBS8 474 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 PPT2Q9UMR5 302 aa11.09□□□□□ -0.63
GABPB1-206ENST00000543881 A0A0G2JN53 185 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 A8MUA0 341 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 PRRG2O14669 202 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 ADAM10O14672 748 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 NDC80O14777 642 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 PHGDHO43175 533 aaKnown RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 RAD51CO43502 376 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 RNH1P13489 461 aaKnown RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 CD46P15529 392 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 GNAZP19086 355 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 TPP2P29144 1249 aaPredicted RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 HNRNPH1P31943 449 aaKnown RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 GMPRP36959 345 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 SKP1P63208 163 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 BTN3A2P78410 334 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 HSF1Q00613 529 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 POU4F1Q01851 419 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 OR4D1Q15615 310 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 ADNP2Q6IQ32 1131 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 FRA10AC1Q70Z53 315 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 VN1R5Q7Z5H4 357 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 RPS19BP1Q86WX3 136 aaKnown RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 ZNF227Q86WZ6 799 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 EID3Q8N140 333 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 SLC5A8Q8N695 610 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 TMEM178AQ8NBL3 297 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 ESAMQ96AP7 390 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 ERP44Q9BS26 406 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 CLK4Q9HAZ1 481 aaKnown RBP11.08□□□□□ -0.64
GABPB1-206ENST00000543881 PRDM9Q9NQV7 894 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 NSMCE4AQ9NXX6 385 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 CLDN16Q9Y5I7 305 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 HCFC1P51610 2035 aa11.08□□□□□ -0.64
GABPB1-206ENST00000543881 TCRBV9S1A1TA0A576 114 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 LRIT2A6NDA9 550 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 FAM187AA6NFU0 413 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 URADA6NGE7 173 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 SAGE2PA6NJ88 616 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 TGFBR3LH3BV60 316 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 SP1P08047 785 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 CCDC166P0CW27 439 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 IGFBP2P18065 325 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 GGT5P36269 586 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 KCNC1P48547 511 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 HNRNPFP52597 415 aaKnown RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 TAS2R50P59544 299 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 GPX6P59796 221 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 OC90Q02509 493 aaPredicted RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 C2orf54Q08AI8 447 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 TMIGD1Q6UXZ0 262 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 GALNTL5Q7Z4T8 443 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 LGI4Q8N135 537 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 FAM98AQ8NCA5 519 aaKnown RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 BBOF1Q8ND07 529 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 TMEM52Q8NDY8 209 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 SPATA4Q8NEY3 305 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 MS4A6EQ96DS6 147 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 QRFPRQ96P65 431 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 GPR22Q99680 433 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 RBBP8Q99708 897 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 WHRNQ9P202 907 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 LRFN1Q9P244 771 aa11.07□□□□□ -0.64
GABPB1-206ENST00000543881 ZNF490Q9ULM2 529 aaPredicted RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 INTS1Q8N201 2190 aaKnown RBP11.07□□□□□ -0.64
GABPB1-206ENST00000543881 ANKHD1Q8IWZ3 2542 aaKnown RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 FAM221AA4D161 298 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 FAM159BA6NKW6 160 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 FOXO6A8MYZ6 492 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 PSMD12O00232 456 aaPredicted RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 ERI3O43414 337 aaKnown RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 H2AFYO75367 372 aaKnown RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 FAM155BO75949 473 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 CD1DP15813 335 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 EPORP19235 508 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 CD22P20273 847 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 PPP2R1BP30154 601 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 DNAJA1P31689 397 aaKnown RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 HSPA7P48741 367 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 SLC12A2P55011 1212 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 MLF1P58340 268 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 STXBP1P61764 594 aaKnown RBP11.06□□□□□ -0.64
GABPB1-206ENST00000543881 CALCOCO2Q13137 446 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 TRADDQ15628 312 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 SLC25A25Q6KCM7 469 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 C3orf62Q6ZUJ4 267 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 CYS1Q717R9 158 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 TMEM200AQ86VY9 491 aa11.06□□□□□ -0.64
GABPB1-206ENST00000543881 GPSM1Q86YR5 675 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms