RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SLC33A1O00400 549 aaPredicted RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 USP2O75604 605 aaPredicted RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 DNASE1P24855 282 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 Q6ZVU0 165 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SGCDQ92629 289 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 DGAT2Q96PD7 388 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 TUBA1CQ9BQE3 449 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 NPLQ9BXD5 320 aaPredicted RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 PCBD2Q9H0N5 130 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 MYEF2Q9P2K5 600 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 PCDHGB1Q9Y5G3 927 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 TVP23AA6NH52 213 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 H3BMQ9 156 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SLC1A7O00341 560 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 MSCO60682 206 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 GNRH1P01148 92 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 MT-ND5P03915 603 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 CCND3P30281 292 aaPredicted RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 UNC50Q53HI1 259 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 C6orf136Q5SQH8 315 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ENPP7Q6UWV6 458 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 C14orf80Q86SX3 495 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 COG8Q96MW5 612 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 HIST1H2AAQ96QV6 131 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 NLKQ9UBE8 527 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 CD1DP15813 335 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 CLCNKAP51800 687 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 CARM1Q86X55 608 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 PXYLP1Q8TE99 480 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 NTAN1Q96AB6 310 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 CREB3L1Q96BA8 519 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 RBCK1Q9BYM8 510 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SMG9Q9H0W8 520 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 GRHPRQ9UBQ7 328 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 NDRG2Q9UN36 371 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 TMEM5Q9Y2B1 443 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 EXOSC1Q9Y3B2 195 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 ANKRD66B4E2M5 251 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 B4GAT1O43505 415 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 FLT3LGP49771 235 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ERVK-21P61565 698 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 S100A12P80511 92 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 TLE2Q04725 743 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 LRP8Q14114 963 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 SLC35G1Q2M3R5 365 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ABHD13Q7L211 337 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 MMAAQ8IVH4 418 aaKnown RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 METTL27Q8N6F8 245 aaPredicted RBP11.62□□□□□ -0.55
UBR4-205ENST00000417040 BCO2Q9BYV7 579 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ARL6Q9H0F7 186 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 ABCG4Q9H172 646 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 MAN2C1Q9NTJ4 1040 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 FAIMQ9NVQ4 179 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 PCDHB14Q9Y5E9 798 aa11.62□□□□□ -0.55
UBR4-205ENST00000417040 KRBA1A5PL33 1030 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 BTBD19C9JJ37 291 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 GOSR2O14653 212 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 FLRT2O43155 660 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 RCBTB2O95199 551 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 CYB5AP00167 134 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 CAPNS1P04632 268 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ATP4BP51164 291 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 AIMP2Q13155 320 aaKnown RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 BCL2L15Q5TBC7 163 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 PNPLA1Q8N8W4 532 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 NTPCRQ9BSD7 190 aaKnown RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 IL20RAQ9UHF4 553 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 A8MU76 341 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 M0R129 80 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 WNT9AO14904 365 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 STC1P52823 247 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 PON3Q15166 354 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ANKRD54Q6NXT1 300 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 DPY19L3Q6ZPD9 716 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 PNLDC1Q8NA58 520 aaKnown RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 RGCCQ9H4X1 137 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 C11orf98E9PRG8 122 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 ARL6IP5O75915 188 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 EBLN1P0CF75 366 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 AGXTP21549 392 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 MS4A2Q01362 244 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 POU4F3Q15319 338 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 MS4A13Q5J8X5 152 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 GDF6Q6KF10 455 aaPredicted RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 IGFN1Q86VF2 1251 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 TMEM126BQ8IUX1 230 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 RHPN2P1A8MT19 583 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 NUPL2O15504 423 aaKnown RBP11.61□□□□□ -0.55
UBR4-205ENST00000417040 ANXA3P12429 323 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 MFSD2AQ8NA29 543 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 OR4E2Q8NGC2 313 aa11.61□□□□□ -0.55
UBR4-205ENST00000417040 SLC22A8Q8TCC7 542 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms