RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 AGAP4Q96P64 663 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 KCNC2Q96PR1 638 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 WDR77Q9BQA1 342 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 TBCDQ9BTW9 1192 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 SORBS1Q9BX66 1292 aaKnown RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 NPLQ9BXD5 320 aaPredicted RBP16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 LUZP4Q9P127 313 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 DCDC2Q9UHG0 476 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 ADGRE2Q9UHX3 823 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 EMCNQ9ULC0 261 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
SNRPA1-201ENST00000254193 A0A1B0GTL3 188 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 CDH16O75309 829 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 ATP5A1P25705 553 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 HNRNPFP52597 415 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 LIM2P55344 173 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 RAB38P57729 211 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 OR4D2P58180 307 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 RPS13P62277 151 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 HERVK_113P63132 956 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 TLE1Q04724 770 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 ACTN3Q08043 901 aaPredicted RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 DEPDC1Q5TB30 811 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 IGFL3Q6UXB1 125 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 QSOX2Q6ZRP7 698 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 LINC00696Q6ZRV3 163 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 HPS6Q86YV9 775 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 ACOT4Q8N9L9 421 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 FAM47BQ8NA70 645 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 TMEM52Q8NDY8 209 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 SRFBP1Q8NEF9 429 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 REPS1Q96D71 796 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 MTFMTQ96DP5 389 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 NTMT1Q9BV86 223 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 C1QTNF3Q9BXJ4 246 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 ERVK-6Q9BXR3 956 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 PRDM9Q9NQV7 894 aa16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 FASNP49327 2511 aaKnown RBP16.88■□□□□ 0.29
SNRPA1-201ENST00000254193 CCDC88CQ9P219 2028 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 J3QKU1 62 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 NUDT17P0C025 328 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 ITGAMP11215 1152 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 ICAM2P13598 275 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 ATP5F1P24539 256 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 AP5B1Q2VPB7 878 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 BTBD16Q32M84 506 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 UNC50Q53HI1 259 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 SGO1Q5FBB7 561 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 FAM219BQ5XKK7 198 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 SLC6A19Q695T7 634 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 JMJD6Q6NYC1 403 aaPredicted RBP16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 PAPD4Q6PIY7 484 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 RIPOR1Q6ZS17 1223 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 MILR1Q7Z6M3 343 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 SIRT6Q8N6T7 355 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 OR4F6Q8NGB9 312 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 WDR20Q8TBZ3 569 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 TRPC4APQ8TEL6 797 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 PPP4R1Q8TF05 950 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 TMEM237Q96Q45 408 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 CSF3RQ99062 836 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 ROGDIQ9GZN7 287 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 C12orf65Q9H3J6 166 aaKnown RBP16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 NECTIN3Q9NQS3 549 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 PTGFRNQ9P2B2 879 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 DAPP1Q9UN19 280 aa16.87■□□□□ 0.29
SNRPA1-201ENST00000254193 IGKV3D-11A0A0A0MRZ8 115 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 CYR61O00622 381 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 GLRA3O75311 464 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 SUPT7LO94864 414 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 ETHE1O95571 254 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 OTCP00480 354 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 KRT4P19013 534 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 IMPDH1P20839 514 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 HIST1H1TP22492 207 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 PTX3P26022 381 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 CRHR1P34998 444 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 SSR2P43308 183 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 RAP1GDS1P52306 607 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 PRKAA2P54646 552 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 MLLT10P55197 1068 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 PHEXP78562 749 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 IFFO1Q0D2I5 559 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 PLEKHN1Q494U1 663 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 ZNF678Q5SXM1 525 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 FRG2Q64ET8 278 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 B3GNTL1Q67FW5 361 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 PLAG1Q6DJT9 500 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 TTC19Q6DKK2 380 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 OR4C11Q6IEV9 310 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 LETMD1Q6P1Q0 360 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 ISLR2Q6UXK2 745 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 C4orf33Q8N1A6 199 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 ZADH2Q8N4Q0 377 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 TM9SF4Q92544 642 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 RGMAQ96B86 450 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 MAGEB10Q96LZ2 347 aaPredicted RBP16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 FRG2BQ96QU4 278 aa16.86■□□□□ 0.29
SNRPA1-201ENST00000254193 LPAR4Q99677 370 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms