RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CRYBA2P53672 197 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 PLCL1Q15111 1095 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 BORAQ6PGQ7 559 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 ZFP28Q8NHY6 868 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 MRGPRX1Q96LB2 322 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 QRFPRQ96P65 431 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 MBOAT4Q96T53 435 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 ICKQ9UPZ9 632 aa17.32■□□□□ 0.36
SMPD3-211ENST00000568373 PLXND1Q9Y4D7 1925 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 PRSS38A1L453 326 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 VILLO15195 856 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 FKBP9O95302 570 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 HOXC4P09017 264 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-211ENST00000568373 ETFAP13804 333 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 MRPS21P82921 87 aaKnown RBP17.31■□□□□ 0.36
SMPD3-211ENST00000568373 VLDLRP98155 873 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 FADDQ13158 208 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 RPE65Q16518 533 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 TTC23Q5W5X9 447 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 ADCK2Q7Z695 626 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 TM4SF18Q96CE8 201 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 YTHDF1Q9BYJ9 559 aaKnown RBP17.31■□□□□ 0.36
SMPD3-211ENST00000568373 TRIM4Q9C037 500 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 LHX9Q9NQ69 397 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 TRPV5Q9NQA5 729 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 FAM118AQ9NWS6 357 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 C3orf18Q9UK00 162 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 ACSL6Q9UKU0 697 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 BAG5Q9UL15 447 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 DMTF1Q9Y222 760 aa17.31■□□□□ 0.36
SMPD3-211ENST00000568373 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.31■□□□□ 0.36
SMPD3-211ENST00000568373 MYO10Q9HD67 2058 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 hCG_2039718K7EN88 272 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 SCAMP1O15126 338 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 NDUFS4O43181 175 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 HS6ST1O60243 411 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 LCMT2O60294 686 aaKnown RBP17.3■□□□□ 0.36
SMPD3-211ENST00000568373 ACADMP11310 421 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 PRKACGP22612 351 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 KIAA1024LP59773 190 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 GCNT6Q5T4J0 391 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 ANKRD34AQ69YU3 496 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 TRIM40Q6P9F5 258 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 NUDT13Q86X67 352 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 PLD3Q8IV08 490 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 ARL10Q8N8L6 244 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 RGMAQ96B86 450 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 OR2M4Q96R27 311 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 ADPRHL2Q9NX46 363 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 AHCYL1O43865 530 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 TBX19O60806 448 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 CLEC3AO75596 197 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 AQP1P29972 269 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 CHI3L1P36222 383 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-211ENST00000568373 CASP9P55211 416 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 CLDN2P57739 230 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 RBBP4Q09028 425 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 HEPACAMQ14CZ8 416 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 SLC5A12Q1EHB4 618 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 TMEM26Q6ZUK4 368 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 PIWIL3Q7Z3Z3 882 aaKnown RBP17.3■□□□□ 0.36
SMPD3-211ENST00000568373 DENND6BQ8NEG7 585 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 TTLQ8NG68 377 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 TPD52L3Q96J77 140 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 AMBRA1Q9C0C7 1298 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 GABARAPL1Q9H0R8 117 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 C8orf33Q9H7E9 229 aaPredicted RBP17.3■□□□□ 0.36
SMPD3-211ENST00000568373 CD93Q9NPY3 652 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 COMMD3-BMI1R4GMX3 469 aa17.3■□□□□ 0.36
SMPD3-211ENST00000568373 PRAMEF33A0A0G2JMD5 474 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 TRBC2A0A5B9 178 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 SUV39H1O43463 412 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 GCM2O75603 506 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-211ENST00000568373 SHMT2P34897 504 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 SOAT1P35610 550 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 PIGAP37287 484 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 KCNAB2Q13303 367 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 KIAA1324Q6UXG2 1013 aaKnown RBP17.29■□□□□ 0.36
SMPD3-211ENST00000568373 NATD1Q8N6N6 113 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 ZNF555Q8NEP9 628 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 OR5AK3PQ8NH89 298 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 ADAMTS16Q8TE57 1224 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 CREB3L4Q8TEY5 395 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 PDXPQ96GD0 296 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 RAD21L1Q9H4I0 556 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 TMEM38AQ9H6F2 299 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 C1GALT1Q9NS00 363 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 SCHIP1Q9P0W5 487 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-211ENST00000568373 TMEFF2Q9UIK5 374 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-211ENST00000568373 ADAM29Q9UKF5 820 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 HEBP2Q9Y5Z4 205 aa17.29■□□□□ 0.36
SMPD3-211ENST00000568373 ENO4A6NNW6 628 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 PRICKLE3O43900 615 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 KRT75O95678 551 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ETS2P15036 469 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 GSTM5P46439 218 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 ARHGDIAP52565 204 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 KCNJ10P78508 379 aa17.28■□□□□ 0.36
SMPD3-211ENST00000568373 SFSWAPQ12872 951 aaKnown RBP17.28■□□□□ 0.36
SMPD3-211ENST00000568373 NFATC4Q14934 902 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms