RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 PDSS2Q86YH6 399 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 AMER3Q8N944 861 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 HUS1BQ8NHY5 278 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 AGAP11Q8TF27 550 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 MS4A6EQ96DS6 147 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 TRIM55Q9BYV6 548 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 ZNF304Q9HCX3 659 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 CDC14AQ9UNH5 594 aa17.18■□□□□ 0.34
VEGFA-222ENST00000520948 A0A0A6YYC8 382 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 URADA6NGE7 173 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 C21orf140B9A014 251 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 H0YIG0 161 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 H3BQF6 201 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 I3L1I5 382 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 FOXE1O00358 373 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 NPHS1O60500 1241 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 GALR3O60755 368 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 CNOT3O75175 753 aaKnown RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 PIM1P11309 404 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 PCNAP12004 261 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 ALOX12P18054 663 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 UQCRFS1P47985 274 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 CD97P48960 835 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 STXBP1P61764 594 aaKnown RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 GALNT1Q10472 559 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 CHAF1BQ13112 559 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 HERC3Q15034 1050 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 TOR1AIP1Q5JTV8 583 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 FAM219BQ5XKK7 198 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 FRG2Q64ET8 278 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 GPRIN3Q6ZVF9 776 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 OVCH1Q7RTY7 1134 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 MYLK4Q86YV6 388 aaPredicted RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 RNF175Q8N4F7 328 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 OR9A4Q8NGU2 314 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 ZCCHC10Q8TBK6 192 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 REPS1Q96D71 796 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 PSMG3-AS1Q96PY0 264 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 FRG2BQ96QU4 278 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 TRMOQ9BU70 441 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 GPR87Q9BY21 358 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 SLC26A1Q9H2B4 701 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 SCN3AQ9NY46 2000 aa17.17■□□□□ 0.34
VEGFA-222ENST00000520948 FARSAQ9Y285 508 aaKnown RBP17.17■□□□□ 0.34
VEGFA-222ENST00000520948 IGLV3-12A0A075B6K2 115 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 MAGEB17A8MXT2 336 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 FFAR3O14843 346 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 GPR42O15529 346 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 KLF7O75840 302 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 TGFB1P01137 390 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 ALBP02768 609 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 ZNF888P0CJ79 500 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 IL1RNP18510 177 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 ARRB2P32121 409 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 NEK2P51955 445 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 DSG2Q14126 1118 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CFAP157Q5JU67 520 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 C10orf62Q5T681 223 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CES4AQ5XG92 561 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CPZQ66K79 652 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 HIST2H2BCQ6DN03 193 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 UBE3DQ7Z6J8 389 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 LURAP1LQ8IV03 231 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 NUDCD3Q8IVD9 361 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 METTL27Q8N6F8 245 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 OR2L5Q8NG80 312 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CCT6BQ92526 530 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 GAL3ST3Q96A11 431 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 FKBP10Q96AY3 582 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 MMABQ96EY8 250 aaPredicted RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CMTM7Q96FZ5 175 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 QRFPRQ96P65 431 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 F2RL3Q96RI0 385 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 MTERF1Q99551 399 aaKnown RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 REXO4Q9GZR2 422 aaKnown RBP17.16■□□□□ 0.34
VEGFA-222ENST00000520948 ANKHQ9HCJ1 492 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 TNFRSF12AQ9NP84 129 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 MID1IP1Q9NPA3 183 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 DMRT3Q9NQL9 472 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 PRDM7Q9NQW5 492 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 MAU2Q9Y6X3 613 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 CCDC88CQ9P219 2028 aa17.16■□□□□ 0.34
VEGFA-222ENST00000520948 SERTM1A2A2V5 107 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 VSTM2BA6NLU5 285 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 HMGB1P1B2RPK0 211 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-222ENST00000520948 DNAJB6O75190 326 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 KLHL18O94889 574 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 RECKO95980 971 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 B3GALT4O96024 378 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 ENO1P06733 434 aaKnown RBP17.15■□□□□ 0.34
VEGFA-222ENST00000520948 PTX3P26022 381 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-222ENST00000520948 PTPN4P29074 926 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 SERPINB5P36952 375 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 ARL1P40616 181 aaPredicted RBP17.15■□□□□ 0.34
VEGFA-222ENST00000520948 AVPR1BP47901 424 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 ARFIP1P53367 373 aa17.15■□□□□ 0.34
VEGFA-222ENST00000520948 RPS13P62277 151 aaKnown RBP17.15■□□□□ 0.34
VEGFA-222ENST00000520948 NCF4Q15080 339 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms