RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 RRADP55042 308 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 CDH13P55290 713 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 RAB8AP61006 207 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 KLC1Q07866 573 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 LCP2Q13094 533 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 TRAF3Q13114 568 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 ZRSR2Q15696 482 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 DEFB109BQ30KR1 87 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 UNC50Q53HI1 259 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 CFAP157Q5JU67 520 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 MED25Q71SY5 747 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 VN1R5Q7Z5H4 357 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 PDSS2Q86YH6 399 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 MYRIPQ8NFW9 859 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 OR4F6Q8NGB9 312 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 OR51Q1Q8NH59 317 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 HUS1BQ8NHY5 278 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 TRPC4APQ8TEL6 797 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 SREK1Q8WXA9 508 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 PGM2Q96G03 612 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 WBP1Q96G27 269 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 SMIM10Q96HG1 83 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 KCNC2Q96PR1 638 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 CDK15Q96Q40 435 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 UBL7Q96S82 380 aaPredicted RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 ZNF382Q96SR6 550 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 CRB3Q9BUF7 120 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 NPLQ9BXD5 320 aaPredicted RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 MS4A8Q9BY19 250 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 KLHL31Q9H511 634 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 COPS7BQ9H9Q2 264 aaPredicted RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 SSU72Q9NP77 194 aaKnown RBP14.2□□□□□ -0.14
RNF4-210ENST00000508235 OXSMQ9NWU1 459 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 PSD3Q9NYI0 1048 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 TRPS1Q9UHF7 1281 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 SNX6Q9UNH7 406 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 RNF11Q9Y3C5 154 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 ACTL7BQ9Y614 415 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 ASPMQ8IZT6 3477 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 NUP210LQ5VU65 1888 aa14.2□□□□□ -0.14
RNF4-210ENST00000508235 FOXE1O00358 373 aaPredicted RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 BMP10O95393 424 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 TGFB1P01137 390 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 UMODP07911 640 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 FURINP09958 794 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 JAK1P23458 1154 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 PTX3P26022 381 aaPredicted RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 TSFMP43897 325 aaKnown RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 XCR1P46094 333 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 PLA2G16P53816 162 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 EMP2P54851 167 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 MTTPP55157 894 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 PKNOX1P55347 436 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 BTN3A2P78410 334 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 MAT1AQ00266 395 aaKnown RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 IFT88Q13099 833 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 DDX39BQ13838 428 aaKnown RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 TBR1Q16650 682 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 SYT16Q17RD7 645 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 VWA2Q5GFL6 755 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 ATP1A1-AS1Q5TC04 95 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 KHDRBS2Q5VWX1 349 aaKnown RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 LIPMQ5VYY2 423 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 FRG2Q64ET8 278 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 ZC3H7AQ8IWR0 971 aaKnown RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 HOMEZQ8IX15 550 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 TMEM102Q8N9M5 508 aaPredicted RBP14.19□□□□□ -0.14
RNF4-210ENST00000508235 ARMC2Q8NEN0 867 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 WDR20Q8TBZ3 569 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 TCP10LQ8TDR4 215 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 ADAMTS18Q8TE60 1221 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 TTC9Q92623 222 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 PKNOX2Q96KN3 472 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 FER1L6-AS2Q96M78 137 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 FRG2BQ96QU4 278 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 SERINC2Q96SA4 455 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 TBCDQ9BTW9 1192 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 ELOVL6Q9H5J4 265 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 DMRT3Q9NQL9 472 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 HCN3Q9P1Z3 774 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 C3orf18Q9UK00 162 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 PPT2Q9UMR5 302 aa14.19□□□□□ -0.14
RNF4-210ENST00000508235 ZNF860A6NHJ4 632 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 PSMD12O00232 456 aaPredicted RBP14.18□□□□□ -0.14
RNF4-210ENST00000508235 CHST10O43529 356 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 B3GALT2O43825 422 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 SPAG7O75391 227 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 ENO1P06733 434 aaKnown RBP14.18□□□□□ -0.14
RNF4-210ENST00000508235 HEXBP07686 556 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 SFTPCP11686 197 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 RNH1P13489 461 aaKnown RBP14.18□□□□□ -0.14
RNF4-210ENST00000508235 RAP1GDS1P52306 607 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 NAGLUP54802 743 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 SNRPNP63162 240 aaKnown RBP14.18□□□□□ -0.14
RNF4-210ENST00000508235 CUL3Q13618 768 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 RCN2Q14257 317 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 CASP8Q14790 479 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 AP5B1Q2VPB7 878 aa14.18□□□□□ -0.14
RNF4-210ENST00000508235 DEPDC1Q5TB30 811 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms