RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 JAK1P23458 1154 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CA8P35219 290 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GNL1P36915 607 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLCO1A2P46721 670 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 EIF2B2P49770 351 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 HTR6P50406 440 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CCR3P51677 355 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 HNRNPFP52597 415 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PLTPP55058 493 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 NAA20P61599 178 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 KLRC3Q07444 240 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TFCP2Q12800 502 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PPP2R5CQ13362 524 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF234Q14588 700 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 MELKQ14680 651 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PSMD6Q15008 389 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PDK3Q15120 406 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RGS21Q2M5E4 152 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RABL6Q3YEC7 729 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CCDC14Q49A88 953 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CRY2Q49AN0 593 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CBWD6Q4V339 395 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TMEM35AQ53FP2 167 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAB6CQ53S08 254 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TAF1BQ53T94 588 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ACSBG2Q5FVE4 666 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CBWD3Q5JTY5 395 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 C1orf141Q5JVX7 400 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 DUPD1Q68J44 220 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 C11orf63Q6NUN7 778 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 H2AFVQ71UI9 128 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 Q75L30 129 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CAMKMTQ7Z624 323 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SATL1Q86VE3 508 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SPATA2LQ8IUW3 424 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ALLCQ8N6M5 410 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 C1orf52Q8N6N3 182 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SMRP1Q8NCR6 262 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RBM15BQ8NDT2 890 aaKnown RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TAS1R2Q8TE23 839 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SLC20A1Q8WUM9 679 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 C10orf82Q8WW14 230 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RTP4Q96DX8 246 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CDCA5Q96FF9 252 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 SNF8Q96H20 258 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 EPSTI1Q96J88 318 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ADGRG7Q96K78 797 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PRICKLE1Q96MT3 831 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TRIM51Q9BSJ1 452 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 WWP1Q9H0M0 922 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAB6CQ9H0N0 254 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 NAPBQ9H115 298 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 NEUROG2Q9H2A3 272 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 BLZF1Q9H2G9 400 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 GAREM1Q9H706 876 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZNF696Q9H7X3 374 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ERVMER34-1Q9H9K5 563 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBTD1Q9HAC8 227 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 DIABLOQ9NR28 239 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 ZDHHC18Q9NUE0 388 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 TBC1D7Q9P0N9 293 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 PCYOX1Q9UHG3 505 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 RAB26Q9ULW5 256 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 CHKBQ9Y259 395 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 AP4S1Q9Y587 144 aa4.22□□□□□ -1.73
HMGB1P16-201ENST00000447155 UBE4BO95155 1302 aa4.21□□□□□ -1.73
HMGB1P16-201ENST00000447155 CICQ96RK0 1608 aaPredicted RBP4.21□□□□□ -1.73
HMGB1P16-201ENST00000447155 A0A0G2JPF8 293 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 EXOC1LA0A1B0GW35 172 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PVALEFA0A1B0GWK0 134 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 OR5K3A6NET4 321 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 LACTBL1A8MY62 500 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 ANKRD66B4E2M5 251 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 HNRNPCL3B7ZW38 293 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 PLK4O00444 970 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KPNA4O00629 521 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 INSIG1O15503 277 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 SERPINB7O75635 380 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CAMTA2O94983 1202 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 NTN1O95631 604 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KRT75O95678 551 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 IL1BP01584 269 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 APOEP02649 317 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 FAM58BPP0C7Q3 252 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 HNRNPCL4P0DMR1 293 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 KRT5P13647 590 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 MYOD1P15172 320 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 GM2AP17900 193 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 POLR2CP19387 275 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CA4P22748 312 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CPT2P23786 658 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CCKBRP32239 447 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 GTF2H1P32780 548 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 TCF7P36402 384 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 CDK9P50750 372 aaKnown RBP4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 BCAP31P51572 246 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 RAD23AP54725 363 aa4.21□□□□□ -1.74
HMGB1P16-201ENST00000447155 DSCR9P59020 149 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms