RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 HIST1H2AGP0C0S8 130 aaPredicted RBP10.78□□□□□ -0.68
RAB5C-203ENST00000546881 MLNP12872 115 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 HIST1H2ADP20671 130 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 MAGEA6P43360 314 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 SLC26A5P58743 744 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 HERC3Q15034 1050 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 WHAMMP3Q1A5X7 153 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 DEFB134Q4QY38 66 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 ARMC3Q5W041 872 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 SLC25A25Q6KCM7 469 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 LRRC8EQ6NSJ5 796 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 MAATS1Q7Z4T9 603 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 RPS19BP1Q86WX3 136 aaKnown RBP10.78□□□□□ -0.68
RAB5C-203ENST00000546881 CEP97Q8IW35 865 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 LMNTD2Q8IXW0 634 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 KIF2BQ8N4N8 673 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 MFSD9Q8NBP5 474 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.78□□□□□ -0.68
RAB5C-203ENST00000546881 PLPP5Q8NEB5 264 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 AGAP11Q8TF27 550 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 PYCR2Q96C36 320 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 LINGO1Q96FE5 620 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 HIST1H2AHQ96KK5 128 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 OR1F2PQ96R84 312 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 HIST1H2AJQ99878 128 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 TRIM51Q9BSJ1 452 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 FAM167BQ9BTA0 163 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 H2AFJQ9BTM1 129 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 PARVBQ9HBI1 364 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 LANCL2Q9NS86 450 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 ZNF835Q9Y2P0 537 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 SLC22A7Q9Y694 548 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 SCN2AQ99250 2005 aa10.78□□□□□ -0.68
RAB5C-203ENST00000546881 ASPDHA6ND91 283 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 EFCAB8A8MWE9 144 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 EIF3FO00303 357 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 DNALI1O14645 258 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 CHST10O43529 356 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 DNAJB6O75190 326 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 SLC25A12O75746 678 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 NEURL1O76050 574 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF24P17028 368 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 AGAP20933 346 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 IL10P22301 178 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 JAK1P23458 1154 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 CCND1P24385 295 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 TPP2P29144 1249 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 HNF4AP41235 474 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 CCR8P51685 355 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 MRPS25P82663 173 aaKnown RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 SP140Q13342 867 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 PHKG1Q16816 387 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF468Q5VIY5 522 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 PAQR3Q6TCH7 311 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 LCTLQ6UWM7 567 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 Q6ZPB1 254 aaPredicted RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF295-AS1Q8N0V1 137 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 GHDCQ8N2G8 530 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 TBC1D19Q8N5T2 526 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 CPSF7Q8N684 471 aaKnown RBP10.77□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF740Q8NDX6 193 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 MCUQ8NE86 351 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 CHTF18Q8WVB6 975 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 SLCO2A1Q92959 643 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 TBC1D20Q96BZ9 403 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 PTCHD1Q96NR3 888 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 HAUS8Q9BT25 410 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 FAM129AQ9BZQ8 928 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 RHBGQ9H310 441 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 ARL15Q9NXU5 204 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 TAS2R13Q9NYV9 303 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 NEU2Q9Y3R4 380 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 OTOGQ6ZRI0 2925 aa10.77□□□□□ -0.69
RAB5C-203ENST00000546881 FAM187AA6NFU0 413 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 A8MUA0 341 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 PRRG2O14669 202 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 SLC16A5O15375 505 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 NME2P1O60361 137 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 GALR3O60755 368 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 GUCA1CO95843 209 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 TSPAN12O95859 305 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 ZNF888P0CJ79 500 aaPredicted RBP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 NPPBP16860 134 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 ALOX12P18054 663 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 NME2P22392 152 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 SSTR2P30874 369 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 RFC3P40938 356 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 KIR3DL1P43629 444 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 CYB561P49447 251 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 ITGA8P53708 1063 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 SKP1P63208 163 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 RGS1Q08116 209 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 DHX9Q08211 1270 aaKnown RBP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 CATSPEREQ5SY80 951 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 RBM20Q5T481 1227 aaKnown RBP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 RNASEH2BQ5TBB1 312 aaKnown RBP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 SIAH3Q8IW03 269 aa10.76□□□□□ -0.69
RAB5C-203ENST00000546881 AGGF1Q8N302 714 aaeCLIP10.76□□□□□ -0.69
RAB5C-203ENST00000546881 NAT8LQ8N9F0 302 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms