RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ANKRD37Q7Z713 158 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 PDIK1LQ8N165 341 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 OR5T3Q8NGG3 340 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
GABPB1-206ENST00000543881 FAM45AQ8TCE6 357 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 METTL21AQ8WXB1 218 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 FBXL8Q96CD0 374 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 SNF8Q96H20 258 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 MAGED4Q96JG8 741 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 SPOCK3Q9BQ16 436 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 HAUS8Q9BT25 410 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 TUBB6Q9BUF5 446 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 SARGQ9BW04 601 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 RBCK1Q9BYM8 510 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 RNF32Q9H0A6 362 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 MCCC2Q9HCC0 563 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 ANKHQ9HCJ1 492 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 NAALAD2Q9Y3Q0 740 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 SLC22A7Q9Y694 548 aa11.17□□□□□ -0.62
GABPB1-206ENST00000543881 OR5H15A6NDH6 313 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 FANCGO15287 622 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 TTI1O43156 1089 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 SEC31AO94979 1220 aaKnown RBP11.16□□□□□ -0.62
GABPB1-206ENST00000543881 GUCA1CO95843 209 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 ICAM2P13598 275 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 CCR8P51685 355 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 AP1S2P56377 157 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 RHAGQ02094 409 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 ZNF460Q14592 562 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 FASTKD3Q14CZ7 662 aaKnown RBP11.16□□□□□ -0.62
GABPB1-206ENST00000543881 PPP1R3AQ16821 1122 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 ABHD17BQ5VST6 288 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 FCRLBQ6BAA4 426 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 PLAG1Q6DJT9 500 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 SYDE1Q6ZW31 735 aaPredicted RBP11.16□□□□□ -0.62
GABPB1-206ENST00000543881 AFAP1L2Q8N4X5 818 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 NEIL2Q969S2 332 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 LRRC39Q96DD0 335 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 PEX11GQ96HA9 241 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 PDLIM5Q96HC4 596 aaKnown RBP11.16□□□□□ -0.62
GABPB1-206ENST00000543881 LANCL2Q9NS86 450 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 STMN3Q9NZ72 180 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 CORO1CQ9ULV4 474 aaPredicted RBP11.16□□□□□ -0.62
GABPB1-206ENST00000543881 MEMO1Q9Y316 297 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 SCN2AQ99250 2005 aa11.16□□□□□ -0.62
GABPB1-206ENST00000543881 TRBC2A0A5B9 178 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 CDC7O00311 574 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 NDUFS4O43181 175 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 OR1F1O43749 312 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 CDC123O75794 336 aaPredicted RBP11.15□□□□□ -0.62
GABPB1-206ENST00000543881 CYC1P08574 325 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 SLC35G6P0C7Q6 338 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 CD1EP15812 388 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 ZNF37AP17032 561 aaPredicted RBP11.15□□□□□ -0.62
GABPB1-206ENST00000543881 GRK3P35626 688 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 ST13P50502 369 aaKnown RBP11.15□□□□□ -0.62
GABPB1-206ENST00000543881 GNG11P61952 73 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 OLR1P78380 273 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 ZNF33BQ06732 778 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 FRG1Q14331 258 aaKnown RBP11.15□□□□□ -0.62
GABPB1-206ENST00000543881 BTBD16Q32M84 506 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 H3F3CQ6NXT2 135 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 ZC3HC1Q86WB0 502 aaKnown RBP11.15□□□□□ -0.62
GABPB1-206ENST00000543881 SPPL2CQ8IUH8 684 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 TSLPQ969D9 159 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 TSNARE1Q96NA8 513 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 NPAS2Q99743 824 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 FAM129AQ9BZQ8 928 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 TRIM31Q9BZY9 425 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 GPAMQ9HCL2 828 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 MOCS1Q9NZB8 636 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 ZNF835Q9Y2P0 537 aa11.15□□□□□ -0.62
GABPB1-206ENST00000543881 NAV3Q8IVL0 2385 aa11.15□□□□□ -0.63
GABPB1-206ENST00000543881 NPEPPSL1A6NEC2 478 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 A8MUI8 341 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 MAN1A2O60476 641 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 GALR3O60755 368 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 PIAS1O75925 651 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ENO2P09104 434 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 SAT1P21673 171 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 RPL21P46778 160 aaKnown RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 SCTRP47872 440 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 AGTR2P50052 363 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ARL4CP56559 192 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 TAS2R39P59534 338 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 AP2B1P63010 937 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 MRPS25P82663 173 aaKnown RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 MGAT5Q09328 741 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 HYAL2Q12891 473 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 PWP1Q13610 501 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 DEFB134Q4QY38 66 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 SFT2D3Q587I9 215 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 Q6ZPB1 254 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 NCCRP1Q6ZVX7 275 aaPredicted RBP11.14□□□□□ -0.63
GABPB1-206ENST00000543881 STRA8Q7Z7C7 330 aa11.14□□□□□ -0.63
GABPB1-206ENST00000543881 ANKRD53Q8N9V6 530 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms