RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 SYPP08247 313 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 PCSK2P16519 638 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 RAP1GDS1P52306 607 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 ZNF763Q0D2J5 394 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 ART3Q13508 389 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 COQ5Q5HYK3 327 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 PAGE3Q5JUK9 113 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 TCEAL6Q6IPX3 200 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 ZC3H14Q6PJT7 736 aaKnown RBP17.75■□□□□ 0.43
CLN3-206ENST00000360019 FAM92BQ6ZTR7 304 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 ASPGQ86U10 573 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 DEFB107AQ8IZN7 70 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 C19orf47Q8N9M1 422 aaKnown RBP17.75■□□□□ 0.43
CLN3-206ENST00000360019 CDC26Q8NHZ8 85 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 TCEAL3Q969E4 200 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 RGMAQ96B86 450 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 MS4A6EQ96DS6 147 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 TM4SF19Q96DZ7 209 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 GTPBP2Q9BX10 602 aaKnown RBP17.75■□□□□ 0.43
CLN3-206ENST00000360019 SLC6A16Q9GZN6 736 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 RAB33BQ9H082 229 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 FAM60AQ9NP50 221 aa17.75■□□□□ 0.43
CLN3-206ENST00000360019 CASC3O15234 703 aaKnown RBP17.74■□□□□ 0.43
CLN3-206ENST00000360019 P2RX6O15547 441 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 B4GAT1O43505 415 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 AKAP10O43572 662 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 ENGP17813 658 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 PRPS1L1P21108 318 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 GPR3P46089 330 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 PPM1FP49593 454 aaPredicted RBP17.74■□□□□ 0.43
CLN3-206ENST00000360019 PLA2G16P53816 162 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 CLNS1AP54105 237 aaKnown RBP17.74■□□□□ 0.43
CLN3-206ENST00000360019 C21orf58P58505 322 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 UGT8Q16880 541 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 TMEM35AQ53FP2 167 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 NCSTNQ92542 709 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 TESCQ96BS2 214 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 TGM7Q96PF1 710 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 C17orf62Q9BQA9 187 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 CENPKQ9BS16 269 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 C1GALT1Q9NS00 363 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 EPHA6Q9UF33 1036 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 PCDHGA5Q9Y5G8 931 aa17.74■□□□□ 0.43
CLN3-206ENST00000360019 RP1P56715 2156 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 LOC105369274A0A096LPK9 316 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 A0A0G2JN53 185 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 LOC102723532A0A0G2JNH3 316 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 DYTNA2CJ06 578 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 SLC9B1P1A6NJY1 282 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 HCRTR1O43613 425 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 PRMT3O60678 531 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 IL6P05231 212 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 PGRP06401 933 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 ASMTP46597 345 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 TOR1AIP1Q5JTV8 583 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 SLC2A7Q6PXP3 512 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 C16orf89Q6UX73 402 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 DGLUCYQ7Z3D6 616 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 NUDT13Q86X67 352 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 OR4N4Q8N0Y3 316 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 AMER3Q8N944 861 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 Q8N9G6 341 aaPredicted RBP17.73■□□□□ 0.43
CLN3-206ENST00000360019 FAM181AQ8N9Y4 354 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 KCT2Q8NC54 265 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 NT5CQ8TCD5 201 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 C16orf78Q8WTQ4 265 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 CCDC74AQ96AQ1 378 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 THAP11Q96EK4 314 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 CLPTM1LQ96KA5 538 aa17.73■□□□□ 0.43
CLN3-206ENST00000360019 TEFMQ96QE5 360 aaKnown RBP17.73■□□□□ 0.43
CLN3-206ENST00000360019 LEF1Q9UJU2 399 aaPredicted RBP17.73■□□□□ 0.43
CLN3-206ENST00000360019 EXO1Q9UQ84 846 aaKnown RBP17.73■□□□□ 0.43
CLN3-206ENST00000360019 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.73■□□□□ 0.43
CLN3-206ENST00000360019 ERI3O43414 337 aaKnown RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 PGM1P36871 562 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 NUBP1P53384 320 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 SNRPNP63162 240 aaKnown RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 PHC1P78364 1004 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 CFHR1Q03591 330 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PWP1Q13610 501 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 NR0B2Q15466 257 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 OR4C11Q6IEV9 310 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 C8orf82Q6P1X6 216 aaPredicted RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 GUSBP11Q6P575 273 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 ABHD17CQ6PCB6 329 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 HACD2Q6Y1H2 254 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 ZNF793Q6ZN11 406 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PAGE2Q7Z2X7 111 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PGAM4Q8N0Y7 254 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 EID2Q8N6I1 236 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 PCYOX1LQ8NBM8 494 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 OR2L5Q8NG80 312 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 MCUR1Q96AQ8 359 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 AHCYL2Q96HN2 611 aaKnown RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 THTPAQ9BU02 230 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 DDX31Q9H8H2 851 aaKnown RBP17.72■□□□□ 0.43
CLN3-206ENST00000360019 WDR41Q9HAD4 459 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 MYNNQ9NPC7 610 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 H0YGG7 62 aa17.72■□□□□ 0.43
CLN3-206ENST00000360019 FXYD1O00168 92 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms