RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 HAT1O14929 419 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ANKRD28O15084 1053 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 COQ9O75208 318 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SH3BGRLO75368 114 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TYRP1P17643 537 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 PIK3R1P27986 724 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ZFP36L2P47974 494 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RPL38P63173 70 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 TUBA4AP68366 448 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 CSTF3Q12996 717 aaKnown RBP14.06□□□□□ -0.16
CXCL12-201ENST00000343575 FLOT2Q14254 428 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 IL23RQ5VWK5 629 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SPATA19Q7Z5L4 167 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ZNF554Q86TJ5 538 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 HOMEZQ8IX15 550 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 CEP76Q8TAP6 659 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SLC22A18Q96BI1 424 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 AIF1LQ9BQI0 150 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 SARGQ9BW04 601 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 NT5DC2Q9H857 520 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 DMRT3Q9NQL9 472 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 UBAP1Q9NZ09 502 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 DLGAP4Q9Y2H0 992 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 RNF215Q9Y6U7 377 aa14.06□□□□□ -0.16
CXCL12-201ENST00000343575 LY6G6EA0A0G2JKS1 128 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 LILRA5A6NI73 299 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PRR33A8MZF0 331 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 CASC3O15234 703 aaKnown RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 TNFSF14O43557 240 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PRAMEF10O60809 474 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SEC22BO75396 215 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 TGFB1P01137 390 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 G6PDP11413 515 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 HSD3B1P14060 373 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 ZNF23P17027 643 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 AMD1P17707 334 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 MAGP20916 626 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 HSD3B2P26439 372 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 CMPK1P30085 196 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 BCL6P41182 706 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PIK3CBP42338 1070 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 MRPL19P49406 292 aaKnown RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 CDK9P50750 372 aaKnown RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 ATP4BP51164 291 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SQLEQ14534 574 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 HIST2H2ACQ16777 129 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 IMPG1Q17R60 797 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SMU1Q2TAY7 513 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 HIST2H2AA3Q6FI13 130 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 DHRS4L2Q6PKH6 230 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PAOXQ6QHF9 649 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SPESP1Q6UW49 350 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PAQR7Q86WK9 346 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 PGAM4Q8N0Y7 254 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 KRT78Q8N1N4 520 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 METTL25Q8N6Q8 603 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 NUDT8Q8WV74 236 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 CMTM7Q96FZ5 175 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 FCRL1Q96LA6 429 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 COL25A1Q9BXS0 654 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 MRPL1Q9BYD6 325 aaKnown RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 GRIP2Q9C0E4 1043 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 AICDAQ9GZX7 198 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SLC52A3Q9NQ40 469 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 VPS29Q9UBQ0 182 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 RSL24D1Q9UHA3 163 aaKnown RBP14.05□□□□□ -0.16
CXCL12-201ENST00000343575 SLC6A14Q9UN76 642 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 ENTPD2Q9Y5L3 495 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 U3KQA8 63 aa14.05□□□□□ -0.16
CXCL12-201ENST00000343575 LOC100653049A0A140TA62 436 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 PRSS51A0A1B0GVH4 220 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 GSAPA4D1B5 854 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 OR2A25A4D2G3 310 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ZNF701M0R085 212 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ARHGAP33O14559 1287 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 BCAS2O75934 225 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-201ENST00000343575 KRT34O76011 436 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 UBXN7O94888 489 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 PVRP15151 417 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ACADVLP49748 655 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 NME5P56597 212 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 NUP107P57740 925 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 MYBPC1Q00872 1141 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ZIC1Q15915 447 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 FCRL6Q6DN72 434 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 FBXO42Q6P3S6 717 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ARL10Q8N8L6 244 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 AVL9Q8NBF6 648 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 HIPK4Q8NE63 616 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 CREB3L4Q8TEY5 395 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 CHTF18Q8WVB6 975 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 REPS1Q96D71 796 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 FCRL4Q96PJ5 515 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ABCG4Q9H172 646 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 ARRDC1-AS1Q9H2J1 176 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 OR51B5Q9H339 312 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 PPT2Q9UMR5 302 aa14.04□□□□□ -0.16
CXCL12-201ENST00000343575 POLR3HQ9Y535 204 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms