RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 FSIP1Q8NA03 581 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 TANGO6Q9C0B7 1094 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 RAI14Q9P0K7 980 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 CDK13Q14004 1512 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 TTC39AQ5SRH9 613 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 RSPH14Q9UHP6 348 aa16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
SMARCA4-214ENST00000589677 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
SMARCA4-214ENST00000589677 ZSCAN25Q6NSZ9 544 aa16.97■□□□□ 0.31
SMARCA4-214ENST00000589677 MYRIPQ8NFW9 859 aa16.97■□□□□ 0.31
SMARCA4-214ENST00000589677 YEATS4O95619 227 aa16.97■□□□□ 0.31
SMARCA4-214ENST00000589677 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
SMARCA4-214ENST00000589677 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-214ENST00000589677 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-214ENST00000589677 IBSPP21815 317 aaPredicted RBP16.96■□□□□ 0.31
SMARCA4-214ENST00000589677 ANAPC15P60006 121 aa16.96■□□□□ 0.31
SMARCA4-214ENST00000589677 DHX37Q8IY37 1157 aaKnown RBP16.96■□□□□ 0.3
SMARCA4-214ENST00000589677 NACAP1Q9BZK3 213 aa16.96■□□□□ 0.3
SMARCA4-214ENST00000589677 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■■■□ 25.1
SMARCA4-214ENST00000589677 PCDHB15Q9Y5E8 787 aa16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 URB2Q14146 1524 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 CAPN2P17655 700 aa16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 ANO6Q4KMQ2 910 aa16.95■□□□□ 0.3
SMARCA4-214ENST00000589677 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 DNAI1Q9UI46 699 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 C8orf76Q96K31 380 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 RAD21O60216 631 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 CCDC175P0C221 793 aa16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 EZRP15311 586 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 TFIP11Q9UBB9 837 aaKnown RBP16.94■□□□□ 0.3
SMARCA4-214ENST00000589677 SIL1Q9H173 461 aa16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 SMC1AQ14683 1233 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 CCDC91Q7Z6B0 441 aa16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 IL16Q14005 1332 aa16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 GIGYF2Q6Y7W6 1299 aaKnown RBP16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
SMARCA4-214ENST00000589677 GBP2P32456 591 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 IFFO1Q0D2I5 559 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CEP112Q8N8E3 955 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 NUP88Q99567 741 aaPredicted RBP16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 A0A1B0GUL7 405 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 FKBP15Q5T1M5 1219 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CNPY2Q9Y2B0 182 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 IGSF3O75054 1194 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CNNM3Q8NE01 707 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 ERO1AQ96HE7 468 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CTAGE15A4D2H0 777 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CTAGE8P0CG41 777 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 ZNF445P59923 1031 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CKAP4Q07065 602 aaKnown RBP16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CTAGE6Q86UF2 777 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 CTAGE4Q8IX94 777 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 PIBF1Q8WXW3 757 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 GOLGA1Q92805 767 aa16.92■□□□□ 0.3
SMARCA4-214ENST00000589677 TUBBP07437 444 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 HSPA4P34932 840 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 MICALL1Q8N3F8 863 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 FYB1O15117 783 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 SPECC1LQ69YQ0 1117 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 TMX1Q9H3N1 280 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 GCOM1H8Y6P7 765 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 MYZAPP0CAP1 466 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 MAPKBP1O60336 1514 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 ARHGAP45Q92619 1136 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 PTPRCP08575 1304 aa16.91■□□□□ 0.3
SMARCA4-214ENST00000589677 RBSNQ9H1K0 784 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 PHAXQ9H814 394 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 HSF2BPO75031 334 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 NBPF11Q86T75 865 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 ZFP91Q96JP5 570 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 ALS2CR12Q96Q35 445 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 MCM6Q14566 821 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 C10orf67Q8IYJ2 551 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 ANKRD62A6NC57 917 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 EBAG9O00559 213 aa16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
SMARCA4-214ENST00000589677 F13A1P00488 732 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 CPLX3Q8WVH0 158 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 PRAM1Q96QH2 718 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 PTGS1P23219 599 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 KLHL10Q6JEL2 608 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 STK11IPQ8N1F8 1099 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 NUP133Q8WUM0 1156 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 OPA1O60313 960 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 INTS4Q96HW7 963 aaKnown RBP16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
SMARCA4-214ENST00000589677 NLRP6P59044 892 aa16.88■□□□□ 0.29
SMARCA4-214ENST00000589677 TYRO3Q06418 890 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms