RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 NFATC2IPQ8NCF5 419 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 IQSEC3Q9UPP2 1182 aaPredicted RBP8.7□□□□□ -1.02
KARSP3-201ENST00000571212 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 RIMBP3CA6NJZ7 1639 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 RIMBP3BA6NNM3 1639 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 RIMBP3Q9UFD9 1639 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 ATP4AP20648 1035 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 MARSP56192 900 aaKnown RBP8.7□□□□□ -1.02
KARSP3-201ENST00000571212 ABHD17AQ96GS6 310 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 NIFKQ9BYG3 293 aaKnown RBP8.7□□□□□ -1.02
KARSP3-201ENST00000571212 ZNF358Q9NW07 568 aa8.7□□□□□ -1.02
KARSP3-201ENST00000571212 CDK2AP1O14519 115 aa8.69□□□□□ -1.02
KARSP3-201ENST00000571212 IRS1P35568 1242 aa8.69□□□□□ -1.02
KARSP3-201ENST00000571212 RASSF7Q02833 373 aa8.69□□□□□ -1.02
KARSP3-201ENST00000571212 MTFR1Q15390 333 aa8.69□□□□□ -1.02
KARSP3-201ENST00000571212 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
KARSP3-201ENST00000571212 CCDC88BA6NC98 1476 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 BNIP3LO60238 219 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 BCRP11274 1271 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 EFHC2Q5JST6 749 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 CRISPLD1Q9H336 500 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 CABP1Q9NZU7 370 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 KIAA1024Q9UPX6 916 aa8.68□□□□□ -1.02
KARSP3-201ENST00000571212 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 USP17L3A6NCW0 530 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 USP17L4A6NCW7 530 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 C2CD2LO14523 706 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 ZBTB7BO15156 539 aaPredicted RBP8.67□□□□□ -1.02
KARSP3-201ENST00000571212 LZTS3O60299 673 aaPredicted RBP8.67□□□□□ -1.02
KARSP3-201ENST00000571212 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 TBCELQ5QJ74 424 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 USP17L2Q6R6M4 530 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 USP17L1Q7RTZ2 530 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
KARSP3-201ENST00000571212 KCTD17Q8N5Z5 321 aa8.67□□□□□ -1.02
KARSP3-201ENST00000571212 DNAAF2Q9NVR5 837 aaKnown RBP8.67□□□□□ -1.02
KARSP3-201ENST00000571212 GDF11O95390 407 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 CTBSQ01459 385 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 TNS4Q8IZW8 715 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 KLRG1Q96E93 195 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 ZCCHC2Q9C0B9 1178 aaKnown RBP8.66□□□□□ -1.02
KARSP3-201ENST00000571212 HCN2Q9UL51 889 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 CNTNAP5Q8WYK1 1306 aa8.66□□□□□ -1.02
KARSP3-201ENST00000571212 ARHGEF11O15085 1522 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 CLDN10P78369 228 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 ARSJQ5FYB0 599 aaPredicted RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 C1orf229Q6ZS94 237 aaPredicted RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 TMEM151AQ8N4L1 468 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 NEDD1Q8NHV4 660 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 OXCT2Q9BYC2 517 aaPredicted RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 NDFIP2Q9NV92 336 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 SCHIP1Q9P0W5 487 aaPredicted RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 NSFL1CQ9UNZ2 370 aaKnown RBP8.65□□□□□ -1.02
KARSP3-201ENST00000571212 PHF24Q9UPV7 400 aa8.65□□□□□ -1.02
KARSP3-201ENST00000571212 BACH1O14867 736 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 ATP9BO43861 1147 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 TPCN2Q8NHX9 752 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 ZDHHC1Q8WTX9 485 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 ENAMQ9NRM1 1142 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 ATXN7L1Q9ULK2 861 aaPredicted RBP8.64□□□□□ -1.03
KARSP3-201ENST00000571212 EIF4G3O43432 1585 aaKnown RBP8.64□□□□□ -1.03
KARSP3-201ENST00000571212 A0A1W2PNR3 127 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 FGFR3P22607 806 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 TXLNAP40222 546 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 EPHA4P54764 986 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 GLMNQ92990 594 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
KARSP3-201ENST00000571212 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
KARSP3-201ENST00000571212 OIP5O43482 229 aa8.63□□□□□ -1.03
KARSP3-201ENST00000571212 MAP2K3P46734 347 aa8.63□□□□□ -1.03
KARSP3-201ENST00000571212 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
KARSP3-201ENST00000571212 ZIC5Q96T25 663 aa8.63□□□□□ -1.03
KARSP3-201ENST00000571212 MKRN1Q9UHC7 482 aaKnown RBP8.63□□□□□ -1.03
KARSP3-201ENST00000571212 SHISA8B8ZZ34 492 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 BMP4P12644 408 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 NBPF1Q3BBV0 1214 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 TRIM50Q86XT4 487 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 C1orf216Q8TAB5 229 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 L3MBTL2Q969R5 705 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
KARSP3-201ENST00000571212 TFIP11Q9UBB9 837 aaKnown RBP8.62□□□□□ -1.03
KARSP3-201ENST00000571212 PCDHGC4Q9Y5F7 938 aa8.62□□□□□ -1.03
KARSP3-201ENST00000571212 CHD1O14646 1710 aa8.61□□□□□ -1.03
KARSP3-201ENST00000571212 DCDC2BA2VCK2 349 aa8.61□□□□□ -1.03
KARSP3-201ENST00000571212 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
KARSP3-201ENST00000571212 FOXK2Q01167 660 aa8.61□□□□□ -1.03
KARSP3-201ENST00000571212 SLC9A9Q8IVB4 645 aa8.61□□□□□ -1.03
KARSP3-201ENST00000571212 OGFOD1Q8N543 542 aa8.61□□□□□ -1.03
KARSP3-201ENST00000571212 ZNF594Q96JF6 807 aaPredicted RBP8.61□□□□□ -1.03
KARSP3-201ENST00000571212 TARBP1Q13395 1621 aaKnown RBP8.61□□□□□ -1.03
KARSP3-201ENST00000571212 TATP17735 454 aaPredicted RBP8.6□□□□□ -1.03
KARSP3-201ENST00000571212 NOS2P35228 1153 aa8.6□□□□□ -1.03
KARSP3-201ENST00000571212 FIGNL1Q6PIW4 674 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms