RNA–Protein interactions for RNA: ENST00000490416.2

NF1-214, Transcript of neurofibromin 1, humanhuman

TSL 3 BASIC

Gene NF1, Length 1,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-214ENST00000490416 USP3Q9Y6I4 520 aa9.56□□□□□ -0.88
NF1-214ENST00000490416 ARHGEF15O94989 841 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 ATP4AP20648 1035 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 MARSP56192 900 aaKnown RBP9.55□□□□□ -0.88
NF1-214ENST00000490416 NLRP8Q86W28 1048 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 TNS4Q8IZW8 715 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 ZNF295-AS1Q8N0V1 137 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 KIAA1024Q9UPX6 916 aa9.55□□□□□ -0.88
NF1-214ENST00000490416 MAFBQ9Y5Q3 323 aaPredicted RBP9.55□□□□□ -0.88
NF1-214ENST00000490416 RNF225M0QZC1 329 aaPredicted RBP9.54□□□□□ -0.88
NF1-214ENST00000490416 UBAP2LQ14157 1087 aaKnown RBP9.54□□□□□ -0.88
NF1-214ENST00000490416 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
NF1-214ENST00000490416 PARP3Q9Y6F1 533 aa9.54□□□□□ -0.88
NF1-214ENST00000490416 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
NF1-214ENST00000490416 A0A1W2PNR3 127 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 BCRP11274 1271 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 RASA1P20936 1047 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 ABHD17AQ96GS6 310 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 ZNF594Q96JF6 807 aaPredicted RBP9.53□□□□□ -0.88
NF1-214ENST00000490416 PPP1R12CQ9BZL4 782 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 ZCCHC2Q9C0B9 1178 aaKnown RBP9.53□□□□□ -0.88
NF1-214ENST00000490416 ZNF232Q9UNY5 417 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 PCDHGC4Q9Y5F7 938 aa9.53□□□□□ -0.88
NF1-214ENST00000490416 BNIP3LO60238 219 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 FGFR3P22607 806 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 EPHA4P54764 986 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 FOXK2Q01167 660 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 KCNMA1Q12791 1236 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 TEAD4Q15561 434 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 BICDL1Q6ZP65 573 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 SIX5Q8N196 739 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 L3MBTL2Q969R5 705 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 ACDQ96AP0 544 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
NF1-214ENST00000490416 M0R2N6 131 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 ATXN7O15265 892 aaPredicted RBP9.51□□□□□ -0.89
NF1-214ENST00000490416 BMP4P12644 408 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 NOS2P35228 1153 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 TBCELQ5QJ74 424 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
NF1-214ENST00000490416 ZIC5Q96T25 663 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 OXCT2Q9BYC2 517 aaPredicted RBP9.51□□□□□ -0.89
NF1-214ENST00000490416 NDFIP2Q9NV92 336 aa9.51□□□□□ -0.89
NF1-214ENST00000490416 SERTM1A2A2V5 107 aa9.5□□□□□ -0.89
NF1-214ENST00000490416 NEDD1Q8NHV4 660 aa9.5□□□□□ -0.89
NF1-214ENST00000490416 ZDHHC1Q8WTX9 485 aa9.5□□□□□ -0.89
NF1-214ENST00000490416 SCARF2Q96GP6 870 aaPredicted RBP9.5□□□□□ -0.89
NF1-214ENST00000490416 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
NF1-214ENST00000490416 TXLNAP40222 546 aa9.49□□□□□ -0.89
NF1-214ENST00000490416 PSMA6P60900 246 aaKnown RBP9.49□□□□□ -0.89
NF1-214ENST00000490416 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
NF1-214ENST00000490416 LRRC4BQ9NT99 713 aa9.49□□□□□ -0.89
NF1-214ENST00000490416 ZNF777Q9ULD5 760 aaPredicted RBP9.49□□□□□ -0.89
NF1-214ENST00000490416 LMOD1P29536 600 aaPredicted RBP9.48□□□□□ -0.89
NF1-214ENST00000490416 SEC13P55735 322 aa9.48□□□□□ -0.89
NF1-214ENST00000490416 TSPAN10Q9H1Z9 355 aaPredicted RBP9.48□□□□□ -0.89
NF1-214ENST00000490416 NEUROD4Q9HD90 331 aa9.48□□□□□ -0.89
NF1-214ENST00000490416 GDF2Q9UK05 429 aaPredicted RBP9.48□□□□□ -0.89
NF1-214ENST00000490416 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
NF1-214ENST00000490416 OIP5O43482 229 aa9.47□□□□□ -0.89
NF1-214ENST00000490416 CTBSQ01459 385 aa9.47□□□□□ -0.89
NF1-214ENST00000490416 TSEN2Q8NCE0 465 aaKnown RBP9.47□□□□□ -0.89
NF1-214ENST00000490416 VRTNQ9H8Y1 702 aa9.47□□□□□ -0.89
NF1-214ENST00000490416 DCDC2BA2VCK2 349 aa9.46□□□□□ -0.9
NF1-214ENST00000490416 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.9
NF1-214ENST00000490416 GPC6Q9Y625 555 aaPredicted RBP9.46□□□□□ -0.9
NF1-214ENST00000490416 EML1O00423 815 aa9.45□□□□□ -0.9
NF1-214ENST00000490416 MAPTP10636 758 aaKnown RBP9.45□□□□□ -0.9
NF1-214ENST00000490416 TNP2Q05952 138 aa9.45□□□□□ -0.9
NF1-214ENST00000490416 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
NF1-214ENST00000490416 SAMD5Q5TGI4 173 aa9.45□□□□□ -0.9
NF1-214ENST00000490416 PODNQ7Z5L7 613 aa9.45□□□□□ -0.9
NF1-214ENST00000490416 C2CD2LO14523 706 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 PPP1R12BO60237 982 aaPredicted RBP9.44□□□□□ -0.9
NF1-214ENST00000490416 DKK1O94907 266 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 FAM157BP0CG42 384 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 IRS1P35568 1242 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 RASSF7Q02833 373 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 TMEM151AQ8N4L1 468 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 GALNT6Q8NCL4 622 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 RHPN1Q8TCX5 695 aa9.44□□□□□ -0.9
NF1-214ENST00000490416 FAM196BA6NMK8 535 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 GDF11O95390 407 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 DPYDQ12882 1025 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 PTK7Q13308 1070 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
NF1-214ENST00000490416 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 KANK3Q6NY19 840 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 LRRC69Q6ZNQ3 347 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 HINFPQ9BQA5 517 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 HCN4Q9Y3Q4 1203 aa9.43□□□□□ -0.9
NF1-214ENST00000490416 ATAD2Q6PL18 1390 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 PHF20L1A8MW92 1017 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L15C9J2P7 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L10C9JJH3 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L13C9JLJ4 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L12C9JPN9 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L11C9JVI0 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L21D6R901 530 aa9.42□□□□□ -0.9
NF1-214ENST00000490416 USP17L18D6R9N7 530 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms