RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 LDHAL6AQ6ZMR3 332 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 SPATA32Q96LK8 384 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 GBP2P32456 591 aaPredicted RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 TMEM266Q2M3C6 531 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 COMMD10Q9Y6G5 202 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 F6X3S4 739 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 TEX13AQ9BXU3 409 aaPredicted RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 SLC12A7Q9Y666 1083 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 WASLO00401 505 aaPredicted RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 LDHCP07864 332 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 JDP2Q8WYK2 163 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 PODXL2Q9NZ53 605 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 TSPY2A6NKD2 308 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 ZNF213O14771 459 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 KRT85P78386 507 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 TSG101Q99816 390 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 BAG4O95429 457 aaKnown RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 TMPOP42166 694 aaKnown RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 CHD1LQ86WJ1 897 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 WDR63Q8IWG1 891 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 SNRKQ9NRH2 765 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 MAP3K2Q9Y2U5 619 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 RIMBP2O15034 1052 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 TXLNBQ8N3L3 684 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 KIF1BPQ96EK5 621 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 BEGAINQ9BUH8 593 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 HYPKQ9NX55 129 aa8.23□□□□□ -1.09
CD46-212ENST00000469535 CWC25Q9NXE8 425 aaPredicted RBP8.23□□□□□ -1.09
CD46-212ENST00000469535 IFIT3O14879 490 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 GUCY1B3Q02153 619 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 CABLES1Q8TDN4 633 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 CCDC39Q9UFE4 941 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 IQSEC3Q9UPP2 1182 aaPredicted RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 GOLGA6L10A6NI86 522 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 JAKMIP3Q5VZ66 844 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 BICD1Q96G01 975 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 CDK13Q14004 1512 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 CCDC152Q4G0S7 254 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 PRPF40BQ6NWY9 871 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 ZCRB1Q8TBF4 217 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 NASPP49321 788 aaPredicted RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 MVPQ14764 893 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 SPTY2D1Q68D10 685 aaPredicted RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 KIAA1328Q86T90 577 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 ZNF354CQ86Y25 554 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 KAT14Q9H8E8 782 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 PUF60Q9UHX1 559 aaKnown RBP8.22□□□□□ -1.09
CD46-212ENST00000469535 CCDC194A0A1B0GVG4 234 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 CCP110O43303 1012 aa8.22□□□□□ -1.09
CD46-212ENST00000469535 CCDC112Q8NEF3 446 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 DNAAF4Q8WXU2 420 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 MACROD2A1Z1Q3 448 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 KLHL10Q6JEL2 608 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 MPNDQ8N594 471 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 CCDC191Q8NCU4 936 aa8.21□□□□□ -1.09
CD46-212ENST00000469535 TNNT1P13805 278 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 KIAA0586Q9BVV6 1533 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 SSRP1Q08945 709 aaKnown RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 RAB34Q9BZG1 259 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 NCKAP5LQ9HCH0 1330 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 H0YHG0 523 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 CETN2P41208 172 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 CTNNBL1Q8WYA6 563 aaPredicted RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 TAF4BQ92750 862 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 CT47B1P0C2W7 299 aaPredicted RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 FAM193AP78312 1265 aa8.21□□□□□ -1.1
CD46-212ENST00000469535 HSP90AA2PQ14568 343 aaPredicted RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 RNF41Q9H4P4 317 aaPredicted RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 LRRFIP2Q9Y608 721 aaKnown RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 URB2Q14146 1524 aaKnown RBP8.21□□□□□ -1.1
CD46-212ENST00000469535 GSTO1P78417 241 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 PDE4BQ07343 736 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 TMEM57Q8N5G2 664 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 NIP7Q9Y221 180 aaKnown RBP eCLIP8.2□□□□□ -1.1
CD46-212ENST00000469535 WDR33Q9C0J8 1336 aaKnown RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 CCDC196A0A1B0GTZ2 297 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 GOLIM4O00461 696 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 EZRP15311 586 aaKnown RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 SYCP3Q8IZU3 236 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 STK32BQ9NY57 414 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 DAPK1P53355 1430 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 CBFA2T2O43439 604 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 MBD3O95983 291 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 CCDC192P0DO97 292 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 USP8P40818 1118 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 DBF4Q9UBU7 674 aaPredicted RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 CFAP45Q9UL16 551 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 MMRN2Q9H8L6 949 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 RTCBQ9Y3I0 505 aaKnown RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 IDI1Q13907 227 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 CCDC83Q8IWF9 413 aa8.2□□□□□ -1.1
CD46-212ENST00000469535 ZSCAN31Q96LW9 406 aaPredicted RBP8.2□□□□□ -1.1
CD46-212ENST00000469535 TSPYL1Q9H0U9 437 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms