RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 MYO19Q96H55 970 aa7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 NIFKQ9BYG3 293 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 GRIP2Q9C0E4 1043 aa7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZNF395Q9H8N7 513 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-211ENST00000466538 H3BRB1 525 aa7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 CAPN5O15484 640 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZNF211Q13398 564 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 ECM1Q16610 540 aa7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 TBCELQ5QJ74 424 aa7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZNF295-AS1Q8N0V1 137 aa7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 TUT1Q9H6E5 874 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 CABP1Q9NZU7 370 aa7.5□□□□□ -1.21
CDC42BPA-211ENST00000466538 EML1O00423 815 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 SPINT1O43278 529 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 TMEM214Q6NUQ4 689 aaKnown RBP7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 RHBDD1Q8TEB9 315 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 L3MBTL2Q969R5 705 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 USP3Q9Y6I4 520 aa7.49□□□□□ -1.21
CDC42BPA-211ENST00000466538 GNASQ5JWF2 1037 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 SLC27A3Q5K4L6 730 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 COX20Q5RI15 118 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 C1orf53Q5VUE5 145 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 ALKBH2Q6NS38 261 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 DNAJC14Q6Y2X3 702 aaPredicted RBP7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 STIM2Q9P246 746 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZNF232Q9UNY5 417 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 PDZRN3Q9UPQ7 1066 aa7.48□□□□□ -1.21
CDC42BPA-211ENST00000466538 RANGAP1P46060 587 aaPredicted RBP7.47□□□□□ -1.21
CDC42BPA-211ENST00000466538 ARHGAP4P98171 946 aa7.47□□□□□ -1.21
CDC42BPA-211ENST00000466538 ZDHHC1Q8WTX9 485 aa7.47□□□□□ -1.21
CDC42BPA-211ENST00000466538 SAP130Q9H0E3 1048 aa7.47□□□□□ -1.21
CDC42BPA-211ENST00000466538 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
CDC42BPA-211ENST00000466538 SPATA31C2B4DYI2 1134 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 AVPP01185 164 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 BRD2P25440 801 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 RTN1Q16799 776 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 C11orf91Q3C1V1 193 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 WDR44Q5JSH3 913 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 ZSCAN29Q8IWY8 852 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 ALDH16A1Q8IZ83 802 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 LINC00528Q8N1L1 170 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 ABTB2Q8N961 1025 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 FOXD4L4Q8WXT5 416 aaPredicted RBP7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 CITED4Q96RK1 184 aa7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 QTRT2Q9H974 415 aaKnown RBP7.46□□□□□ -1.22
CDC42BPA-211ENST00000466538 MTMR3Q13615 1198 aa7.45□□□□□ -1.22
CDC42BPA-211ENST00000466538 NOM1Q5C9Z4 860 aaKnown RBP7.45□□□□□ -1.22
CDC42BPA-211ENST00000466538 INSM2Q96T92 566 aaPredicted RBP7.45□□□□□ -1.22
CDC42BPA-211ENST00000466538 HCN4Q9Y3Q4 1203 aa7.45□□□□□ -1.22
CDC42BPA-211ENST00000466538 SMCPP49901 116 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 COL19A1Q14993 1142 aa7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 HIF1AQ16665 826 aa7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 CTC1Q2NKJ3 1217 aa7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 ASB16Q96NS5 453 aa7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 POLMQ9NP87 494 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 GPC6Q9Y625 555 aaPredicted RBP7.44□□□□□ -1.22
CDC42BPA-211ENST00000466538 RBM47A0AV96 593 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 TNFRSF10BO14763 440 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 DGAT1O75907 488 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 BMP2P12643 396 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 MPSTP25325 297 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 MAPK1P28482 360 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 SCARF1Q14162 830 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 C4orf17Q53FE4 359 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 MRPL14Q6P1L8 145 aaKnown RBP7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 ZDHHC3Q9NYG2 299 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 PARP3Q9Y6F1 533 aa7.43□□□□□ -1.22
CDC42BPA-211ENST00000466538 NDUFB5O43674 189 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 EIF1AXP47813 144 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 NBPF1Q3BBV0 1214 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 BRPF3Q9ULD4 1205 aa7.42□□□□□ -1.22
CDC42BPA-211ENST00000466538 FAM187AA6NFU0 413 aa7.41□□□□□ -1.22
CDC42BPA-211ENST00000466538 AAMPQ13685 434 aa7.41□□□□□ -1.22
CDC42BPA-211ENST00000466538 RGL4Q8IZJ4 473 aa7.41□□□□□ -1.22
CDC42BPA-211ENST00000466538 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
CDC42BPA-211ENST00000466538 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
CDC42BPA-211ENST00000466538 TATP17735 454 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 PLA2G4AP47712 749 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 POU4F2Q12837 409 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 NBPF10Q6P3W6 841 aaKnown RBP7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 RNF217Q8TC41 542 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 AIDAQ96BJ3 306 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 FAM13BQ9NYF5 915 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 ANKIB1Q9P2G1 1089 aa7.4□□□□□ -1.22
CDC42BPA-211ENST00000466538 TTLL8A6PVC2 850 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 E9PSI1 815 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 TXLNAP40222 546 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 USP5P45974 858 aa7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 RBM25P49756 843 aaKnown RBP7.39□□□□□ -1.23
CDC42BPA-211ENST00000466538 PDE3BQ13370 1112 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms