RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 CLDN10P78369 228 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 C4orf17Q53FE4 359 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 GPR161Q8N6U8 529 aaKnown RBP8.44□□□□□ -1.06
NCLP2-201ENST00000416078 SPOCK3Q9BQ16 436 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 TIMMDC1Q9NPL8 285 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
NCLP2-201ENST00000416078 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
NCLP2-201ENST00000416078 KIAA1024Q9UPX6 916 aa8.44□□□□□ -1.06
NCLP2-201ENST00000416078 A0A1B0GTH6 734 aa8.43□□□□□ -1.06
NCLP2-201ENST00000416078 ZBTB7BO15156 539 aaPredicted RBP8.43□□□□□ -1.06
NCLP2-201ENST00000416078 TMEM214Q6NUQ4 689 aaKnown RBP8.43□□□□□ -1.06
NCLP2-201ENST00000416078 SV2AQ7L0J3 742 aa8.43□□□□□ -1.06
NCLP2-201ENST00000416078 SIX5Q8N196 739 aa8.43□□□□□ -1.06
NCLP2-201ENST00000416078 ZNF837Q96EG3 531 aaPredicted RBP8.43□□□□□ -1.06
NCLP2-201ENST00000416078 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
NCLP2-201ENST00000416078 ZNF358Q9NW07 568 aa8.43□□□□□ -1.06
NCLP2-201ENST00000416078 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
NCLP2-201ENST00000416078 A6NJY4 79 aa8.42□□□□□ -1.06
NCLP2-201ENST00000416078 BACH1O14867 736 aa8.42□□□□□ -1.06
NCLP2-201ENST00000416078 DKK1O94907 266 aa8.42□□□□□ -1.06
NCLP2-201ENST00000416078 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
NCLP2-201ENST00000416078 EPHA4P54764 986 aa8.42□□□□□ -1.06
NCLP2-201ENST00000416078 LARGE2Q8N3Y3 721 aa8.42□□□□□ -1.06
NCLP2-201ENST00000416078 TOPBP1Q92547 1522 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 M0R2N6 131 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 CDK2AP1O14519 115 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 F11P03951 625 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 KRT76Q01546 638 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 VWA5B2Q8N398 1253 aa8.41□□□□□ -1.06
NCLP2-201ENST00000416078 DNAAF2Q9NVR5 837 aaKnown RBP8.41□□□□□ -1.06
NCLP2-201ENST00000416078 DNMBPQ6XZF7 1577 aa8.4□□□□□ -1.06
NCLP2-201ENST00000416078 H7C1W4 665 aa8.4□□□□□ -1.06
NCLP2-201ENST00000416078 PSME1Q06323 249 aa8.4□□□□□ -1.06
NCLP2-201ENST00000416078 OGFOD1Q8N543 542 aa8.4□□□□□ -1.06
NCLP2-201ENST00000416078 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
NCLP2-201ENST00000416078 ZNF777Q9ULD5 760 aaPredicted RBP8.4□□□□□ -1.06
NCLP2-201ENST00000416078 CDC14CA4D256 554 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 LBRQ14739 615 aaKnown RBP8.39□□□□□ -1.07
NCLP2-201ENST00000416078 DBN1Q16643 649 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 PLA2G4EQ3MJ16 856 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 CFAP70Q5T0N1 1121 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 ZNF385CQ66K41 422 aaPredicted RBP8.39□□□□□ -1.07
NCLP2-201ENST00000416078 CCDC102BQ68D86 513 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 TPCN2Q8NHX9 752 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 NIFKQ9BYG3 293 aaKnown RBP8.39□□□□□ -1.07
NCLP2-201ENST00000416078 SCHIP1Q9P0W5 487 aaPredicted RBP8.39□□□□□ -1.07
NCLP2-201ENST00000416078 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 USP3Q9Y6I4 520 aa8.39□□□□□ -1.07
NCLP2-201ENST00000416078 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
NCLP2-201ENST00000416078 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 COL25A1Q9BXS0 654 aaPredicted RBP8.38□□□□□ -1.07
NCLP2-201ENST00000416078 THBS1P07996 1170 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 PHKA2P46019 1235 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 GALNT6Q8NCL4 622 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 C1orf216Q8TAB5 229 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 GAS2L1Q99501 681 aaPredicted RBP8.38□□□□□ -1.07
NCLP2-201ENST00000416078 CRISPLD1Q9H336 500 aa8.38□□□□□ -1.07
NCLP2-201ENST00000416078 CUX1P39880 1505 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 FAM196BA6NMK8 535 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 MSX1P28360 303 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 PLA2G4AP47712 749 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 GAS6Q14393 721 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 RNFT1Q5M7Z0 435 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 POTEAQ6S8J7 498 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
NCLP2-201ENST00000416078 ARHGEF15O94989 841 aa8.36□□□□□ -1.07
NCLP2-201ENST00000416078 ATP4AP20648 1035 aa8.36□□□□□ -1.07
NCLP2-201ENST00000416078 PTK7Q13308 1070 aa8.36□□□□□ -1.07
NCLP2-201ENST00000416078 UBAP2LQ14157 1087 aaKnown RBP8.36□□□□□ -1.07
NCLP2-201ENST00000416078 RIPOR1Q6ZS17 1223 aa8.36□□□□□ -1.07
NCLP2-201ENST00000416078 NUCKS1Q9H1E3 243 aaKnown RBP8.36□□□□□ -1.07
NCLP2-201ENST00000416078 RASA1P20936 1047 aa8.35□□□□□ -1.07
NCLP2-201ENST00000416078 LMOD1P29536 600 aaPredicted RBP8.35□□□□□ -1.07
NCLP2-201ENST00000416078 TEAD4Q15561 434 aa8.35□□□□□ -1.07
NCLP2-201ENST00000416078 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
NCLP2-201ENST00000416078 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
NCLP2-201ENST00000416078 IFT140Q96RY7 1462 aa8.35□□□□□ -1.07
NCLP2-201ENST00000416078 WRNQ14191 1432 aaPredicted RBP eCLIP8.35□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L21D6R901 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
NCLP2-201ENST00000416078 ZDHHC1Q8WTX9 485 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 ZNF594Q96JF6 807 aaPredicted RBP8.34□□□□□ -1.07
NCLP2-201ENST00000416078 KRTAP4-7Q9BYR0 210 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 GPAMQ9HCL2 828 aa8.34□□□□□ -1.07
NCLP2-201ENST00000416078 POLA1P09884 1462 aaPredicted RBP8.34□□□□□ -1.07
NCLP2-201ENST00000416078 SLURP2P0DP57 97 aa8.33□□□□□ -1.08
NCLP2-201ENST00000416078 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
NCLP2-201ENST00000416078 SLC9A9Q8IVB4 645 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms