RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 IGHDP01880 384 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 WASF1Q92558 559 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 TBX22Q9Y458 520 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.28
USP6NL-201ENST00000277575 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 JARID2Q92833 1246 aaPredicted RBP13.27□□□□□ -0.28
USP6NL-201ENST00000277575 ZNF287Q9HBT7 754 aa13.27□□□□□ -0.28
USP6NL-201ENST00000277575 SHANK2Q9UPX8 1470 aa13.27□□□□□ -0.29
USP6NL-201ENST00000277575 HSPA2P54652 639 aa13.27□□□□□ -0.29
USP6NL-201ENST00000277575 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
USP6NL-201ENST00000277575 SNRKQ9NRH2 765 aa13.27□□□□□ -0.29
USP6NL-201ENST00000277575 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
USP6NL-201ENST00000277575 AKAP4Q5JQC9 854 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 XAGE3Q8WTP9 111 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
USP6NL-201ENST00000277575 EVI5LQ96CN4 794 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 MKNK2Q9HBH9 465 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 FLT4P35916 1363 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 ZHX3Q9H4I2 956 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 NPATQ14207 1427 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 TOM1O60784 492 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 MTHFSDQ2M296 383 aaKnown RBP13.26□□□□□ -0.29
USP6NL-201ENST00000277575 CDC5LQ99459 802 aaKnown RBP13.26□□□□□ -0.29
USP6NL-201ENST00000277575 NCKAP5LQ9HCH0 1330 aa13.26□□□□□ -0.29
USP6NL-201ENST00000277575 GOLIM4O00461 696 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 SERPINC1P01008 464 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 GCP02774 474 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 ZNF213O14771 459 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 RPGRQ92834 1020 aaKnown RBP13.25□□□□□ -0.29
USP6NL-201ENST00000277575 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
USP6NL-201ENST00000277575 EIF4G3O43432 1585 aaKnown RBP13.25□□□□□ -0.29
USP6NL-201ENST00000277575 DISP1Q96F81 1524 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 STIM1Q13586 685 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 TSHZ3Q63HK5 1081 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 TBC1D9Q6ZT07 1266 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 PCDHB15Q9Y5E8 787 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 HMGB1P09429 215 aaKnown RBP13.25□□□□□ -0.29
USP6NL-201ENST00000277575 TTLL5Q6EMB2 1281 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 SPC24Q8NBT2 197 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 RHPN1Q8TCX5 695 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 NUP62CLQ9H1M0 184 aa13.25□□□□□ -0.29
USP6NL-201ENST00000277575 CCDC196A0A1B0GTZ2 297 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 UBAP1LF5GYI3 381 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 ODF2Q5BJF6 829 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 SMARCE1Q969G3 411 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 SSBP05455 408 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP6NL-201ENST00000277575 HDAC1Q13547 482 aaPredicted RBP13.24□□□□□ -0.29
USP6NL-201ENST00000277575 IQCA1Q86XH1 822 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 AK7Q96M32 723 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 EYA1Q99502 592 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 DACH1Q9UI36 760 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 LIMCH1Q9UPQ0 1083 aa13.24□□□□□ -0.29
USP6NL-201ENST00000277575 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 PER1O15534 1290 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-201ENST00000277575 RANBP6O60518 1105 aaKnown RBP13.23□□□□□ -0.29
USP6NL-201ENST00000277575 A0A1W2PP64 1363 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 CCDC173Q0VFZ6 552 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 TMEM132AQ24JP5 1023 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 CCDC82Q8N4S0 544 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 PHACTR3Q96KR7 559 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-201ENST00000277575 CEP57L1Q8IYX8 460 aa13.23□□□□□ -0.29
USP6NL-201ENST00000277575 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-201ENST00000277575 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
USP6NL-201ENST00000277575 ZFYVE27Q5T4F4 411 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 KSR2Q6VAB6 950 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 MPNDQ8N594 471 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 RNF41Q9H4P4 317 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 MAP3K19Q56UN5 1328 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 MRPL50Q8N5N7 158 aaKnown RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 ANKRD44Q8N8A2 993 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 TBC1D2Q9BYX2 928 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 GRM8O00222 908 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
USP6NL-201ENST00000277575 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 ARGLU1Q9NWB6 273 aaPredicted RBP13.22□□□□□ -0.29
USP6NL-201ENST00000277575 NFATC2IPQ8NCF5 419 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 C8orf76Q96K31 380 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 GRPEL1Q9HAV7 217 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
USP6NL-201ENST00000277575 VAMP4O75379 141 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 RFC4P35249 363 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 TNNT3P45378 269 aaPredicted RBP13.21□□□□□ -0.29
USP6NL-201ENST00000277575 DDB1Q16531 1140 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
USP6NL-201ENST00000277575 SCAND2PQ9GZW5 306 aaPredicted RBP13.21□□□□□ -0.29
USP6NL-201ENST00000277575 ZNHIT6Q9NWK9 470 aaKnown RBP13.21□□□□□ -0.29
USP6NL-201ENST00000277575 IFIT3O14879 490 aaKnown RBP13.21□□□□□ -0.3
USP6NL-201ENST00000277575 HMGN5P82970 282 aaKnown RBP13.21□□□□□ -0.3
USP6NL-201ENST00000277575 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.3
USP6NL-201ENST00000277575 LMBR1LQ6UX01 489 aa13.21□□□□□ -0.3
USP6NL-201ENST00000277575 PZPP20742 1482 aa13.21□□□□□ -0.3
USP6NL-201ENST00000277575 IL2RBP14784 551 aa13.2□□□□□ -0.3
USP6NL-201ENST00000277575 NUCB1Q02818 461 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms