RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 LARP1Q6PKG0 1096 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 RBSNQ9H1K0 784 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 F6X3S4 739 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 ZNF445P59923 1031 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 PDE4CQ08493 712 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 ZSCAN23Q3MJ62 389 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 NOL7Q9UMY1 257 aaKnown RBP19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 USP54Q70EL1 1684 aa19.5■□□□□ 0.71
MAP1LC3B-201ENST00000268607 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
MAP1LC3B-201ENST00000268607 MTERF4Q7Z6M4 381 aaKnown RBP19.49■□□□□ 0.71
MAP1LC3B-201ENST00000268607 APBB1O00213 710 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 DYNC1I1O14576 645 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 ZNF500O60304 480 aaPredicted RBP19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 AK9Q5TCS8 1911 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 EVA1CP58658 441 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 DMTNQ08495 405 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 CHMP4BQ9H444 224 aaKnown RBP19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 ROBO1Q9Y6N7 1651 aa19.48■□□□□ 0.71
MAP1LC3B-201ENST00000268607 HS1BP3Q53T59 392 aa19.47■□□□□ 0.71
MAP1LC3B-201ENST00000268607 ZSCAN20P17040 1043 aaPredicted RBP19.47■□□□□ 0.71
MAP1LC3B-201ENST00000268607 PRIM1P49642 420 aaKnown RBP19.47■□□□□ 0.71
MAP1LC3B-201ENST00000268607 GCC1Q96CN9 775 aa19.47■□□□□ 0.71
MAP1LC3B-201ENST00000268607 MEIS3Q99687 375 aa19.47■□□□□ 0.71
MAP1LC3B-201ENST00000268607 PHRF1Q9P1Y6 1649 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-201ENST00000268607 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
MAP1LC3B-201ENST00000268607 LMBRD1Q9NUN5 540 aa19.46■□□□□ 0.71
MAP1LC3B-201ENST00000268607 MAP3K5Q99683 1374 aa19.46■□□□□ 0.71
MAP1LC3B-201ENST00000268607 PKP1Q13835 747 aa19.45■□□□□ 0.7
MAP1LC3B-201ENST00000268607 PLEKHO1Q53GL0 409 aaPredicted RBP19.45■□□□□ 0.7
MAP1LC3B-201ENST00000268607 PDLIM2Q96JY6 352 aa19.45■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CAMTA1Q9Y6Y1 1673 aa19.45■□□□□ 0.7
MAP1LC3B-201ENST00000268607 UTP14CQ5TAP6 766 aaKnown RBP19.45■□□□□ 0.7
MAP1LC3B-201ENST00000268607 RGS12O14924 1447 aa19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 C1orf141Q5JVX7 400 aa19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 C16orf71Q8IYS4 520 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 BBXQ8WY36 941 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CCDC94Q9BW85 323 aaPredicted RBP19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 RBM27Q9P2N5 1060 aaKnown RBP19.44■□□□□ 0.7
MAP1LC3B-201ENST00000268607 SLC39A6Q13433 755 aa19.43■□□□□ 0.7
MAP1LC3B-201ENST00000268607 DDX54Q8TDD1 881 aaKnown RBP19.43■□□□□ 0.7
MAP1LC3B-201ENST00000268607 MEGF6O75095 1541 aa19.43■□□□□ 0.7
MAP1LC3B-201ENST00000268607 ZKSCAN5Q9Y2L8 839 aa19.42■□□□□ 0.7
MAP1LC3B-201ENST00000268607 PRAMEF22A3QJZ6 481 aa19.42■□□□□ 0.7
MAP1LC3B-201ENST00000268607 TOM1O60784 492 aa19.42■□□□□ 0.7
MAP1LC3B-201ENST00000268607 PRPF40AO75400 957 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 TATP17735 454 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 SMARCA5O60264 1052 aaPredicted RBP19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 NUCB2P80303 420 aa19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 TEFQ10587 303 aa19.41■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CYP27B1O15528 508 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 TAF7Q15545 349 aaPredicted RBP19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 PTPRCP08575 1304 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 EP400Q96L91 3159 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 ANXA1P04083 346 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 SASS6Q6UVJ0 657 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 OTUD7AQ8TE49 926 aaPredicted RBP19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 KAT6BQ8WYB5 2073 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 COL18A1P39060 1754 aa19.4■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.7
MAP1LC3B-201ENST00000268607 AKAP4Q5JQC9 854 aa19.39■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CEP85Q6P2H3 762 aa19.39■□□□□ 0.7
MAP1LC3B-201ENST00000268607 GPT2Q8TD30 523 aa19.39■□□□□ 0.7
MAP1LC3B-201ENST00000268607 STK31Q9BXU1 1019 aa19.39■□□□□ 0.7
MAP1LC3B-201ENST00000268607 CDC45O75419 566 aa19.39■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CYP2E1P05181 493 aaPredicted RBP19.39■□□□□ 0.69
MAP1LC3B-201ENST00000268607 NFATC2IPQ8NCF5 419 aa19.39■□□□□ 0.69
MAP1LC3B-201ENST00000268607 JARID2Q92833 1246 aaPredicted RBP19.39■□□□□ 0.69
MAP1LC3B-201ENST00000268607 DCTPP1Q9H773 170 aa19.39■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CPDO75976 1380 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 FKBP5Q13451 457 aaPredicted RBP19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 ANKRD44Q8N8A2 993 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CHAMP1Q96JM3 812 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 WDR17Q8IZU2 1322 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 BTBD11A6QL63 1104 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CRYBG1Q9Y4K1 1723 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 GTF2E1P29083 439 aaPredicted RBP19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 RABEP1Q15276 862 aa19.38■□□□□ 0.69
MAP1LC3B-201ENST00000268607 AMOTQ4VCS5 1084 aa19.37■□□□□ 0.69
MAP1LC3B-201ENST00000268607 NHSL1Q5SYE7 1610 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 SYCE3A1L190 88 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 GSPT1P15170 499 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 FLIIQ13045 1269 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 ZGPATQ8N5A5 531 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 HTATSF1O43719 755 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CBX1P83916 185 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 PPP4R3BQ5MIZ7 849 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 PLEKHM2Q8IWE5 1019 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 TSC1Q92574 1164 aa19.36■□□□□ 0.69
MAP1LC3B-201ENST00000268607 ATP10DQ9P241 1426 aa19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 COL5A2P05997 1499 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 PHKG2P15735 406 aa19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 TMEM63CQ9P1W3 806 aa19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 PIP4K2AP48426 406 aaPredicted RBP19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 CCDC30Q5VVM6 783 aa19.35■□□□□ 0.69
MAP1LC3B-201ENST00000268607 RPAP2Q8IXW5 612 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms