RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KIFC1Q9BW19 673 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC19A3Q9BZV2 496 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRIM31Q9BZY9 425 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 COA1Q9GZY4 146 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR51V1Q9H2C8 321 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 HMG20AQ9NP66 347 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MLXIPLQ9NP71 852 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MRPS30Q9NP92 439 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 NUDT15Q9NV35 164 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CMTM6Q9NX76 183 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PKD2L2Q9NZM6 624 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 CCDC59Q9P031 241 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ACTR3BQ9P1U1 418 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 UXTQ9UBK9 157 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC24A2Q9UI40 661 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PSME2Q9UL46 239 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB26Q9ULW5 256 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 RPH3AQ9Y2J0 694 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 MRPS7Q9Y2R9 242 aaKnown RBP4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 HYOU1Q9Y4L1 999 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ASB4Q9Y574 426 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SESN1Q9Y6P5 492 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 AP1M2Q9Y6Q5 423 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 PIAS3Q9Y6X2 628 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZHX2Q9Y6X8 837 aa4.5□□□□□ -1.69
HMGB3P13-201ENST00000511263 SALL1Q9NSC2 1324 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ISPDA4D126 451 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB19A4D1S5 217 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 I3L4J1 428 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 M0QYT0 321 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PGRMC1O00264 195 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TFECO14948 347 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CASC3O15234 703 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARHGEF9O43307 516 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TXNL1O43396 289 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 RNASEH1O60930 286 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 BCAS1O75363 584 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PDE9AO76083 593 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 RHOBTB1O94844 696 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 KLKB1P03952 638 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TFAP2AP05549 437 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 QDPRP09417 244 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 DHRS4L1P0CG22 281 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 SMIM6P0DI80 62 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 SAGP10523 405 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PRPS2P11908 318 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GNSP15586 552 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 NCF2P19878 526 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 S100PP25815 95 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDH5P33151 784 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 BMI1P35226 326 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CYLC1P35663 651 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CAPZA2P47755 286 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TPMTP51580 245 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARHGDIAP52565 204 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC7A2P52569 658 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDH6P55285 790 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GAD2Q05329 585 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 CHRNDQ07001 517 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PMPCAQ10713 525 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 GTDC1Q4AE62 458 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 DNAL1Q4LDG9 190 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 LRRC24Q50LG9 513 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 LBHQ53QV2 105 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 EFHC1Q5JVL4 640 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 PPM1LQ5SGD2 360 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM171A1Q5VUB5 890 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ATG16L1Q676U5 607 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 RETSATQ6NUM9 610 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FUT10Q6P4F1 479 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ALKBH5Q6P6C2 394 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF852Q6ZMS4 543 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 C1orf122Q6ZSJ8 110 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 KDELC2Q7Z4H8 507 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 AACSQ86V21 672 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FJX1Q86VR8 437 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 C2CD5Q86YS7 1000 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TMEM126BQ8IUX1 230 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TAGAPQ8N103 731 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 AVL9Q8NBF6 648 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR4D10Q8NGI6 311 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR8K5Q8NH50 307 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPPL3Q8TCT6 385 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 KCNG4Q8TDN1 519 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 THAP4Q8WY91 577 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 UFD1Q92890 307 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 USP13Q92995 863 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TCEAL3Q969E4 200 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 YIPF5Q969M3 257 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 NXPE2Q96DL1 559 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM84BQ96KN1 310 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 C12orf57Q99622 126 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 BCL7BQ9BQE9 202 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM213AQ9BRX8 229 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 NTPCRQ9BSD7 190 aaKnown RBP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TBC1D10AQ9BXI6 508 aa4.49□□□□□ -1.69
HMGB3P13-201ENST00000511263 TWSG1Q9GZX9 223 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms