RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FCGR2BP31994 310 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 FCGR2CP31995 323 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RPL9P32969 192 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 ACSL1P33121 698 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RBMXP38159 391 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 FNTAP49354 379 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 PPOXP50336 477 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SLC25A1P53007 311 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CASP6P55212 293 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 VEZF1Q14119 521 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CRMP1Q14194 572 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CRYMQ14894 314 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 KIR2DS1Q14954 304 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 TBCEQ15813 527 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 POM121L1PQ3SYA9 428 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 MCMDC2Q4G0Z9 681 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZRANB3Q5FWF4 1079 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 MUC21Q5SSG8 566 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RNASEH2BQ5TBB1 312 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 AGAP6Q5VW22 663 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 OTPQ5XKR4 325 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 DHRS7BQ6IAN0 325 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 ASPHD2Q6ICH7 369 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 OR4A47Q6IF82 309 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ARMCX5Q6P1M9 558 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 NUP54Q7Z3B4 507 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CPLX4Q7Z7G2 160 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 FBXO16Q8IX29 292 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 RCOR2Q8IZ40 523 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CARNMT1Q8N4J0 409 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 GBP7Q8N8V2 638 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 BANPQ8N9N5 519 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 OR6F1Q8NGZ6 308 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SETD7Q8WTS6 366 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 SLAMF9Q96A28 289 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 EXOC4Q96A65 974 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 RRP36Q96EU6 259 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZBED6CLQ96FA7 236 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 PGAM5Q96HS1 289 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 FAM71F1Q96KD3 344 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 IMMP1LQ96LU5 166 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SFXN2Q96NB2 322 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ANKRD27Q96NW4 1050 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 BTBD9Q96Q07 612 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 MCCC1Q96RQ3 725 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 IL12RB2Q99665 862 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SRSF8Q9BRL6 282 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 PI4K2AQ9BTU6 479 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 PAPOLGQ9BWT3 736 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 RSPO3Q9BXY4 272 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 AGXT2Q9BYV1 514 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SLC25A39Q9BZJ4 359 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 HRH4Q9H3N8 390 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 FZD8Q9H461 694 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 OPA3Q9H6K4 179 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ISG20L2Q9H9L3 353 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 RAVER2Q9HCJ3 691 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 TBC1D13Q9NVG8 400 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 POLLQ9UGP5 575 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 SLC12A6Q9UHW9 1150 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 FBXO2Q9UK22 296 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 PILRAQ9UKJ1 303 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ITGA11Q9UKX5 1188 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZNF346Q9UL40 294 aaKnown RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 CORO1CQ9ULV4 474 aaPredicted RBP0.42□□□□□ -2.34
COPB1-212ENST00000534771 MGAT4AQ9UM21 535 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 NEU3Q9UQ49 428 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 WDR83OSQ9Y284 106 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 PADI2Q9Y2J8 665 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 CPQQ9Y646 472 aa0.42□□□□□ -2.34
COPB1-212ENST00000534771 ZNF644Q9H582 1327 aaPredicted RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 A0A087WZ39 114 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 TEX48A0A1B0GUV7 120 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 BCLAF3A2AJT9 711 aaKnown RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 MTMR11A4FU01 709 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 LRCOL1A6NCL2 159 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 IGLON5A6NGN9 336 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 FRG2CA6NGY1 282 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 RRN3P2A6NIE6 340 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 NKX6-3A6NJ46 265 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 CCT8L1PA6NM43 557 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 A8MV72 311 aaPredicted RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 C2CD4DB7Z1M9 353 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 MAGEB2O15479 319 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 PIP5K1CO60331 668 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 RNASEH2AO75792 299 aaKnown RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 OR6B1O95007 311 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 OR2C1O95371 312 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 DDX58O95786 925 aaKnown RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 CLEC3BP05452 202 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 CLTBP09497 229 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 PGAM2P15259 253 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 ZNF44P15621 663 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 GABRB1P18505 474 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 PSMA4P25789 261 aaKnown RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 RPA1P27694 616 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 PPARGP37231 505 aaPredicted RBP0.41□□□□□ -2.34
COPB1-212ENST00000534771 TNFRSF4P43489 277 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 CRYBA2P53672 197 aa0.41□□□□□ -2.34
COPB1-212ENST00000534771 MAPK12P53778 367 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms