RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 SULT1C3Q6IMI6 304 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 CAPN13Q6MZZ7 669 aaPredicted RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 LRIG3Q6UXM1 1119 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 DNAJC22Q8N4W6 341 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 DTWD1Q8N5C7 304 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 ZNF655Q8N720 491 aaPredicted RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 PDPRQ8NCN5 879 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 OR2A1Q8NGT9 310 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 OR56A3Q8NH54 315 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 OR2W6PQ8NHA6 318 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 RHBDF1Q96CC6 855 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 TCTN2Q96GX1 697 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 GPR78Q96P69 363 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 ATOH8Q96SQ7 321 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 MIPEPQ99797 713 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 EGFL8Q99944 293 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 SGPP1Q9BX95 441 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 SLC7A5P2Q9GIP4 190 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 ALG9Q9H6U8 611 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 CNOT10Q9H9A5 744 aaKnown RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 UTP6Q9NYH9 597 aaKnown RBP14.98□□□□□ -0.01
USB1-208ENST00000563207 NUDT4Q9NZJ9 180 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 ANKMY1Q9P2S6 941 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 DCDC2Q9UHG0 476 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 TMCO1Q9UM00 188 aa14.98□□□□□ -0.01
USB1-208ENST00000563207 HRH2P25021 359 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 CMPK1P30085 196 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 OTX2P32243 289 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 GGT5P36269 586 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 GRIA3P42263 894 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 NAE1Q13564 534 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 KLHDC8AQ8IYD2 350 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 OR2L3Q8NG85 312 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 PKNOX2Q96KN3 472 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 MRPL57Q9BQC6 102 aaKnown RBP14.97□□□□□ -0.01
USB1-208ENST00000563207 HAUS8Q9BT25 410 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 SLC22A11Q9NSA0 550 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 SEC16AO15027 2179 aa14.97□□□□□ -0.01
USB1-208ENST00000563207 SMIM23A6NLE4 172 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 TTLL8A6PVC2 850 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 NRP2O60462 931 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 CEACAM4O75871 244 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 PYGBP11216 843 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 ITGAXP20702 1163 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 MAGP20916 626 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 GNLYP22749 145 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 CCT5P48643 541 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 CD97P48960 835 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 TBPL1P62380 186 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 RELAQ04206 551 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 TECRLQ5HYJ1 363 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 THEMIS2Q5TEJ8 643 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 PRAMEF13Q5VWM6 474 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 ICE2Q659A1 982 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 METTL2BQ6P1Q9 378 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 SUSD1Q6UWL2 747 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 LCTLQ6UWM7 567 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 MBOAT1Q6ZNC8 495 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 GPR135Q8IZ08 494 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 CYP4X1Q8N118 509 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 PLD6Q8N2A8 252 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 PPFIBP2Q8ND30 876 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 GBP5Q96PP8 586 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 CAPS2Q9BXY5 557 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 UNKQ9C0B0 810 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 ATG10Q9H0Y0 220 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 MRPL46Q9H2W6 279 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 MRPS30Q9NP92 439 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 CD274Q9NZQ7 290 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 SENP1Q9P0U3 644 aa14.96□□□□□ -0.01
USB1-208ENST00000563207 PTBP2Q9UKA9 531 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 PRRC2CQ9Y520 2896 aaKnown RBP14.96□□□□□ -0.01
USB1-208ENST00000563207 SHANK1Q9Y566 2161 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 GLRA3O75311 464 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 PSMB5P28074 263 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 GMPRP36959 345 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 GLRBP48167 497 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 KCNC1P48547 511 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 YBX1P67809 324 aaKnown RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 ZNF844Q08AG5 666 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 TSTA3Q13630 321 aaPredicted RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 KRT71Q3SY84 523 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 HIST2H2BCQ6DN03 193 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 FCRL6Q6DN72 434 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 RHBDD2Q6NTF9 364 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 FIGLAQ6QHK4 219 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 SH2D5Q6ZV89 423 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 RBMXL3Q8N7X1 1067 aaKnown RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 Q8NA96 180 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 N4BP2L2Q92802 583 aaPredicted RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 ZIM3Q96PE6 472 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 TAC3Q9UHF0 121 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 GRID1Q9ULK0 1009 aa14.95□□□□□ -0.02
USB1-208ENST00000563207 PTRH2Q9Y3E5 179 aaKnown RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 PCDHGA9Q9Y5G4 932 aaKnown RBP14.95□□□□□ -0.02
USB1-208ENST00000563207 A0A1W2PPM1 405 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 SUPT3HB4E1H0 165 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 MAP2K7O14733 419 aa14.94□□□□□ -0.02
USB1-208ENST00000563207 ZSCAN9O15535 394 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms