RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 SUPT3HB4E1H0 165 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 POC1B-GALNT4F8VUJ3 575 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 PRPF4O43172 522 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 RIPK2O43353 540 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 SUPT3HO75486 399 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 RFPL1O75677 317 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ALBP02768 609 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 C2P06681 752 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 CD63P08962 238 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 SLC35G6P0C7Q6 338 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 PIM1P11309 404 aaPredicted RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 OTX2P32243 289 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 SLC26A3P40879 764 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 MAGEA12P43365 314 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 SERPINB9P50453 376 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 CDC16Q13042 620 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 TRMT10CQ7L0Y3 403 aaKnown RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 MRGPREQ86SM8 312 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ASPGQ86U10 573 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 TMEM151BQ8IW70 566 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 OR4K1Q8NGD4 311 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 APOBEC4Q8WW27 367 aaKnown RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 THAP11Q96EK4 314 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ATOH8Q96SQ7 321 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 SARGQ9BW04 601 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 CNOT10Q9H9A5 744 aaKnown RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ZNF304Q9HCX3 659 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 CD274Q9NZQ7 290 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 TLK1Q9UKI8 766 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 NXT1Q9UKK6 140 aaKnown RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 ACOT9Q9Y305 439 aa12.28□□□□□ -0.44
COL5A1-206ENST00000465877 MRPS2Q9Y399 296 aaKnown RBP12.28□□□□□ -0.44
COL5A1-206ENST00000465877 TRBC2A0A5B9 178 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ARGFXA6NJG6 315 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 UBXN8O00124 270 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TAPBPO15533 448 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 NDUFS4O43181 175 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 LCMT2O60294 686 aaKnown RBP12.27□□□□□ -0.45
COL5A1-206ENST00000465877 KRT38O76015 456 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 S100BP04271 92 aaPredicted RBP12.27□□□□□ -0.45
COL5A1-206ENST00000465877 UMODP07911 640 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 CNTFP26441 200 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TNFRSF8P28908 595 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TYK2P29597 1187 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 GGT5P36269 586 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 GDF5P43026 501 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 MSH2P43246 934 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 GLRBP48167 497 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 HSPA7P48741 367 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 CHAF1BQ13112 559 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ATP1A4Q13733 1029 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 DSG2Q14126 1118 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 NKG7Q16617 165 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 NDUFA9Q16795 377 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 FAM83EQ2M2I3 478 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 FBXO48Q5FWF7 155 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 CDKL4Q5MAI5 379 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 SULT1C3Q6IMI6 304 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 NXPE4Q6UWF7 544 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 OVCH1Q7RTY7 1134 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ISCA2Q86U28 154 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 APLFQ8IW19 511 aaPredicted RBP12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TBC1D19Q8N5T2 526 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 MFSD9Q8NBP5 474 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 CAMKVQ8NCB2 501 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF740Q8NDX6 193 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ZCCHC10Q8TBK6 192 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 STAG3L4Q8TBR4 150 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 DCAKDQ8WVC6 231 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 COL26A1Q96A83 441 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 NXNL1Q96CM4 212 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TRIM55Q9BYV6 548 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TXLNGYQ9BZA5 131 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 SOX17Q9H6I2 414 aaPredicted RBP12.27□□□□□ -0.45
COL5A1-206ENST00000465877 GEMIN8Q9NWZ8 242 aaKnown RBP12.27□□□□□ -0.45
COL5A1-206ENST00000465877 TUBD1Q9UJT1 453 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF180Q9UJW8 692 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 CDC14AQ9UNH5 594 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 KCNE2Q9Y6J6 123 aa12.27□□□□□ -0.45
COL5A1-206ENST00000465877 SPTA1P02549 2419 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 CPAMD8Q8IZJ3 1885 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF462Q96JM2 2506 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 A0A0A6YYC8 382 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 I3L1I5 382 aaPredicted RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 OR1F1O43749 312 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 DNAJB5O75953 348 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 KLHL2O95198 593 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 GNAZP19086 355 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 SNRPNP63162 240 aaKnown RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 FAM53BQ14153 422 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 TMEM214Q6NUQ4 689 aaKnown RBP12.26□□□□□ -0.45
COL5A1-206ENST00000465877 PRSS41Q7RTY9 318 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 LRRC70Q7Z2Q7 622 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 PPP1R32Q7Z5V6 425 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF843Q8N446 348 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 AMER3Q8N944 861 aa12.26□□□□□ -0.45
COL5A1-206ENST00000465877 EIF1ADQ8N9N8 165 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms