RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 HIDE1A8MVS5 230 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 NPC1O15118 1278 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 VEGFDO43915 354 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 NOBOXO60393 691 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 JRKO75564 520 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 CPSF4O95639 269 aaKnown RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 SLC16A8O95907 504 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 C1GALT1C1LP0DN25 315 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 CTNNB1P35222 781 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PIK3CBP42338 1070 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 ITGA1P56199 1179 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 CD47Q08722 323 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 ZNF658BQ4V348 819 aaPredicted RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 KDM4DQ6B0I6 523 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PDE12Q6L8Q7 609 aaKnown RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 UNC5DQ6UXZ4 953 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 SLC30A8Q8IWU4 369 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 C1orf52Q8N6N3 182 aaKnown RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 OR9A1PQ8NGU1 263 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 HUS1BQ8NHY5 278 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 POF1BQ8WVV4 589 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PPP1R14BQ96C90 147 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 EPYCQ99645 322 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 SGPP1Q9BX95 441 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 REEP1Q9H902 201 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 TRIM39Q9HCM9 518 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 TMEFF2Q9UIK5 374 aaPredicted RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 PSME2Q9UL46 239 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PTPRSQ13332 1948 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PI15O43692 258 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 RFPL2O75678 378 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 IDSP22304 550 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 IST1P53990 364 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 ZNF763Q0D2J5 394 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 DDX39BQ13838 428 aaKnown RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 LINC00299Q6ZSB3 139 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 IKBIPQ70UQ0 350 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PARS2Q7L3T8 475 aaKnown RBP17.43■□□□□ 0.38
CD40-201ENST00000372276 PTOV1Q86YD1 416 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 C11orf65Q8NCR3 313 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PHOSPHO2Q8TCD6 241 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 SPPL3Q8TCT6 385 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 OR4K3Q96R72 315 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 NODALQ96S42 347 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 REEP4Q9H6H4 257 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 PALMDQ9NP74 551 aa17.43■□□□□ 0.38
CD40-201ENST00000372276 GNG14A0A1W2PPG7 69 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 GABRR3A8MPY1 467 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 KPNA3O00505 521 aaPredicted RBP17.42■□□□□ 0.38
CD40-201ENST00000372276 SUV39H1O43463 412 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 PCDH7O60245 1069 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 IFNA14P01570 189 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 LAMP1P11279 417 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 JUNDP17535 347 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 HSD17B2P37059 387 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 PREPP48147 710 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 RPA4Q13156 261 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 TSPYL5Q86VY4 417 aaPredicted RBP17.42■□□□□ 0.38
CD40-201ENST00000372276 SYTL1Q8IYJ3 562 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 CHPFQ8IZ52 775 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 ZFP90Q8TF47 636 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 NUS1Q96E22 293 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 ZNF347Q96SE7 839 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 PRM3Q9NNZ6 103 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 AHSPQ9NZD4 102 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 FZD4Q9ULV1 537 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 PADI2Q9Y2J8 665 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 MRPS23Q9Y3D9 190 aaKnown RBP17.42■□□□□ 0.38
CD40-201ENST00000372276 PCDHGB3Q9Y5G1 929 aa17.42■□□□□ 0.38
CD40-201ENST00000372276 C1orf226A1L170 272 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 KLHL33A6NCF5 533 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 TMEM202A6NGA9 273 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 SLC1A7O00341 560 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 NFATC1O95644 943 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 C9P02748 559 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 CYP17A1P05093 508 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 BDKRB1P46663 353 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 YAP1P46937 504 aaKnown RBP17.41■□□□□ 0.38
CD40-201ENST00000372276 RAE1P78406 368 aaKnown RBP17.41■□□□□ 0.38
CD40-201ENST00000372276 MVKQ03426 396 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 FADDQ13158 208 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 CDK5R2Q13319 367 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 RGNQ15493 299 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 MOGQ16653 247 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 MEP1AQ16819 746 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 ZNF829Q3KNS6 432 aaPredicted RBP17.41■□□□□ 0.38
CD40-201ENST00000372276 TMEM52BQ4KMG9 183 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 XAF1Q6GPH4 301 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 TMEM179BQ7Z7N9 219 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 DSG4Q86SJ6 1040 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 SVOPQ8N4V2 548 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 ZNF480Q8WV37 535 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 SORCS1Q8WY21 1168 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 BORCS5Q969J3 196 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 MUL1Q969V5 352 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 RAB7BQ96AH8 199 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 HSH2DQ96JZ2 352 aa17.41■□□□□ 0.38
CD40-201ENST00000372276 LIN28AQ9H9Z2 209 aaKnown RBP17.41■□□□□ 0.38
CD40-201ENST00000372276 ATE1O95260 518 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms