RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 PTGS2P35354 604 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 MEF2AQ02078 507 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 PDK4Q16654 411 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 CPSF7Q8N684 471 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 PRLP01236 227 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 NR2C1P13056 603 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 GKP32189 559 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 TMCO2Q7Z6W1 182 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 ZNF283Q8N7M2 679 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 GKN1Q9NS71 199 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 PRMT5O14744 637 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 IFNW1P05000 195 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 CLCQ05315 142 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 TTC27Q6P3X3 843 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 CFAP77Q6ZQR2 320 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 SCGB1C1Q8TD33 95 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 BPIFB1Q8TDL5 484 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 C16orf58Q96GQ5 468 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 EIF5A2Q9GZV4 153 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 LRRC19Q9H756 370 aa16.56■□□□□ 0.24
CACNA1A-253ENST00000637927 ADAMTS13Q76LX8 1427 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 TCRBV21S2A2A0A5A6 115 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 DLDP09622 509 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 CLCNKAP51800 687 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 ZNF100Q8IYN0 542 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 KREMEN2Q8NCW0 462 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 DQX1Q8TE96 717 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SLC38A4Q969I6 547 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 PELOQ9BRX2 385 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 PLEKHA3Q9HB20 300 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 POLR2CP19387 275 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 KIR3DL1P43629 444 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SMAD2Q15796 467 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 LRRC55Q6ZSA7 311 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 FRS2Q8WU20 508 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 OR8D2Q9GZM6 311 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 FBXL12Q9NXK8 326 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 C2P06681 752 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 C6orf183Q5T699 404 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SH3RF1Q7Z6J0 888 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SPAG16Q8N0X2 631 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 LRMDAQ9H2I8 198 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 IFNA21P01568 189 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 ADRA1BP35368 520 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 RAB8AP61006 207 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 RPL19P84098 196 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 PRRT3Q5FWE3 981 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 PAQR7Q86WK9 346 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 MCATQ8IVS2 390 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 TAC3Q9UHF0 121 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 GXYLT2A0PJZ3 443 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 ERI3O43414 337 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SNAP91O60641 907 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 USP53Q70EK8 1073 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 IRF2BP2Q7Z5L9 587 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 KCTD13Q8WZ19 329 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 RNPEPL1Q9HAU8 725 aa16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 SPIN1Q9Y657 262 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-253ENST00000637927 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 SLC16A8O95907 504 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 RPL11P62913 178 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 AADATQ8N5Z0 425 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 HERPUD2Q9BSE4 406 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 KCNIP3Q9Y2W7 256 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 ADAM18Q9Y3Q7 739 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 BPGMP07738 259 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 HOXB8P17481 243 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 PSMA1P25786 263 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 GBX2P52951 348 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 CDH4P55283 916 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 SLC5A9Q2M3M2 681 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 TMEM214Q6NUQ4 689 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 LAPTM4BQ86VI4 370 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 RCBTB1Q8NDN9 531 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 SH3RF2Q8TEC5 729 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 CRTAC1Q9NQ79 661 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 HEMK1Q9Y5R4 338 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 BMP6P22004 513 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 GATMP50440 423 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 OR6C70A6NIJ9 312 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 H3BUI4 141 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 SLC1A5Q15758 541 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 GRASPQ7Z6J2 395 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 LRRC52Q8N7C0 313 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 ZNF781Q8N8C0 355 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 CLK4Q9HAZ1 481 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 KCNN3Q9UGI6 736 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 ELOVL7A1L3X0 281 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 GNG2P59768 71 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 ZC3H14Q6PJT7 736 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 C1orf127Q8N9H9 656 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 NPRL2Q8WTW4 380 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 KIAA1143Q96AT1 154 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
CACNA1A-253ENST00000637927 SH2B3Q9UQQ2 575 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms