RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 SYNPO2LQ9H987 977 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 COQ3Q9NZJ6 369 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
CHCHD3-203ENST00000448878 SOWAHDA6NJG2 315 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 FANCGO15287 622 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 ASNA1O43681 348 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 CCNDBP1O95273 360 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 NADKO95544 446 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 CHRM3P20309 590 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 FMO4P31512 558 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 EFNA3P52797 238 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 HSF1Q00613 529 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 ACTN3Q08043 901 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 TBX2Q13207 712 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 MAPKAPK3Q16644 382 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 THEMIS2Q5TEJ8 643 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 PLAG1Q6DJT9 500 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 GALNTL5Q7Z4T8 443 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 LRRC6Q86X45 466 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 CRLF3Q8IUI8 442 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 PLD3Q8IV08 490 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 TC2NQ8N9U0 490 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 PPFIBP2Q8ND30 876 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 OR9A4Q8NGU2 314 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 MCOLN3Q8TDD5 553 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 RAB6BQ9NRW1 208 aa17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 PACSIN2Q9UNF0 486 aaPredicted RBP17.03■□□□□ 0.32
CHCHD3-203ENST00000448878 MED13LQ71F56 2210 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 IGKV1-8A0A0C4DH67 115 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 OR2W5A6NFC9 320 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 PRRG2O14669 202 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 P2RX6O15547 441 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 TSPAN12O95859 305 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 SYF2O95926 243 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 APRTP07741 180 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 STIP1P31948 543 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 SESN2P58004 480 aaPredicted RBP17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 PRDX1Q06830 199 aaKnown RBP17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 ICE2Q659A1 982 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 PEX26Q7Z412 305 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 GHDCQ8N2G8 530 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 HORMAD2Q8N7B1 307 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 RNF214Q8ND24 703 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 MDS2Q8NDY4 140 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 SLC35B2Q8TB61 432 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 ATG4AQ8WYN0 398 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 HCN3Q9P1Z3 774 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 PPT2Q9UMR5 302 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 PCDHGB6Q9Y5F9 930 aa17.02■□□□□ 0.32
CHCHD3-203ENST00000448878 TCRBV7S2A1N4TA0A589 114 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 GABRR3A8MPY1 467 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 ARHGEF33A8MVX0 844 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 HAT1O14929 419 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 NIPSNAP2O75323 286 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 SUN1O94901 812 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 PNLIPRP1P54315 467 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 CRADDP78560 199 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 FAM53BQ14153 422 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 PCID2Q5JVF3 399 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 PRUNE1Q86TP1 453 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 DOLPP1Q86YN1 238 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 EID3Q8N140 333 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 OR51Q1Q8NH59 317 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 FRMD6Q96NE9 622 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 PKP4Q99569 1192 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 ZNF148Q9UQR1 794 aa17.01■□□□□ 0.31
CHCHD3-203ENST00000448878 NCOA6Q14686 2063 aaPredicted RBP17■□□□□ 0.31
CHCHD3-203ENST00000448878 ZNF839A8K0R7 811 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 MATN4O95460 622 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 CATP04040 527 aaKnown RBP17■□□□□ 0.31
CHCHD3-203ENST00000448878 SP1P08047 785 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 ETS1P14921 441 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 CD1EP15812 388 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 RPS3P23396 243 aaKnown RBP eCLIP17■□□□□ 0.31
CHCHD3-203ENST00000448878 XCR1P46094 333 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 EXT1Q16394 746 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 KLHL38Q2WGJ6 581 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 CTSL3PQ5NE16 218 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 ZNF425Q6IV72 752 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 SLC25A25Q6KCM7 469 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 H3F3CQ6NXT2 135 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 ANKRD37Q7Z713 158 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 SDCCAG8Q86SQ7 713 aaPredicted RBP17■□□□□ 0.31
CHCHD3-203ENST00000448878 SLC5A8Q8N695 610 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 M1APQ8TC57 530 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 PEX13Q92968 403 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 SCMH1Q96GD3 660 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 ENKD1Q9H0I2 346 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 CDCP1Q9H5V8 836 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 LRFN1Q9P244 771 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 EPN1Q9Y6I3 576 aaPredicted RBP17■□□□□ 0.31
CHCHD3-203ENST00000448878 AKAP9Q99996 3911 aa17■□□□□ 0.31
CHCHD3-203ENST00000448878 SETD2Q9BYW2 2564 aaPredicted RBP17■□□□□ 0.31
CHCHD3-203ENST00000448878 GRID2IPA4D2P6 1211 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 ASPDHA6ND91 283 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms